Fish Single-cell RNA Database

GENE ID: ENSDARG00000075054

Symbol	Location	Gene type	Genome version	Species
rasgrf2a	10: 3049636 ~ 3106762 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000075054 (rasgrf2a), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000045485	rassf8b	4: 20507105 ~ 20521441 (-)
ENSDARG00000036252	rras2	7: 27834130 ~ 27887883 (+)
ENSDARG00000076435	abhd10a	5: 67884087 ~ 67895855 (-)
ENSDARG00000002816	rasgrf2b	5: 51443009 ~ 51581775 (+)
ENSDARG00000013161	zgc:55558	3: 16662209 ~ 16683623 (+)
ENSDARG00000006553	rras	3: 32410746 ~ 32416121 (+)
ENSDARG00000060496	cacna1ha	3: 39759130 ~ 39952441 (+)
ENSDARG00000076401	cacng3b	3: 35298078 ~ 35375978 (+)
ENSDARG00000039240	cacng5b	3: 56366395 ~ 56394018 (+)
ENSDARG00000003326	cacng5a	6: 21395051 ~ 21455822 (+)
ENSDARG00000115540	cacng4a	6: 21513363 ~ 21521755 (-)
ENSDARG00000095614	cacna1eb	2: 1001560 ~ 1117886 (+)
ENSDARG00000075285	NA	9: 29040386 ~ 29058515 (+)
ENSDARG00000069765	syngap1b	16: 45456066 ~ 45691220 (+)
ENSDARG00000046079	cacng6b	16: 12836143 ~ 12866551 (+)
ENSDARG00000070626	cacng8b	16: 12882381 ~ 12953739 (-)
ENSDARG00000070624	cacng7b	16: 12963020 ~ 13004166 (-)
ENSDARG00000062855	plekhg7	18: 15887830 ~ 15932704 (-)
ENSDARG00000068456	tmem91	18: 36037223 ~ 36046166 (+)
ENSDARG00000073824	NA	18: 26337869 ~ 26418637 (+)
ENSDARG00000063713	syngap1a	19: 232536 ~ 276802 (+)
ENSDARG00000076179	ngef	15: 40074923 ~ 40133784 (+)
ENSDARG00000006923	cacna1ab	11: 30817943 ~ 31026335 (+)
ENSDARG00000075054	rasgrf2a	10: 3049636 ~ 3106762 (+)
ENSDARG00000062865	mras	22: 11857356 ~ 11874688 (+)
ENSDARG00000023886	cacna2d4b	25: 19023737 ~ 19090628 (-)
ENSDARG00000045596	rassf8a	25: 31122806 ~ 31162816 (+)
ENSDARG00000010844	kras	25: 31099908 ~ 31118923 (-)
ENSDARG00000102376	cacng2b	KN149779.1: 312 ~ 11581 (+)
--	abhd10b	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE151354 (wild type)	cartilage	baseline	21dpf, wild type	NA	NA	NA
GSE151354 (nkx3.2 mutant)	cartilage	growth	21dpf, nkx3.2 mutant	NA	NA	NA
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE130526 (fin)	dorsal and anal fin	baseline	adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment	NA	NA	NA
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment	NA	NA	NA
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment	NA	NA	NA
GSE122680 (2dpf)	retina	baseline	2dpf, WT, untreatment	NA	NA	NA
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih	NA	NA	NA
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	6dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000075054

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences