Fish Single-cell RNA Database

GENE ID: ENSDARG00000059412

Symbol	Location	Gene type	Genome version	Species
zgc:111976	24: 1023839 ~ 1036384 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000059412 (zgc:111976), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000009607	ccnc	4: 5764486 ~ 5775507 (-)
ENSDARG00000052109	zgc:114041	5: 66132394 ~ 66146759 (+)
ENSDARG00000038005	med25	3: 30454353 ~ 30488100 (-)
ENSDARG00000000151	thraa	3: 34688022 ~ 34753605 (-)
ENSDARG00000099084	pcif1	6: 55327909 ~ 55354004 (-)
ENSDARG00000070721	vdrb	6: 38954733 ~ 39006449 (-)
ENSDARG00000101009	cited4b	16: 35535171 ~ 35537491 (+)
ENSDARG00000033172	nr2f5	16: 46294337 ~ 46327301 (+)
ENSDARG00000011696	esrrgb	20: 46790056 ~ 46817223 (-)
ENSDARG00000004111	esr1	20: 26359756 ~ 26383375 (-)
ENSDARG00000016318	med7	14: 34064249 ~ 34065937 (+)
ENSDARG00000034734	med6	13: 36135122 ~ 36141486 (-)
ENSDARG00000015064	esrrd	18: 48983506 ~ 48992363 (-)
ENSDARG00000099431	med24	12: 10644074 ~ 10674606 (-)
ENSDARG00000101115	med30	19: 46372115 ~ 46411358 (+)
ENSDARG00000068965	nrip1a	15: 29662401 ~ 29713359 (+)
ENSDARG00000003910	med13b	15: 20060643 ~ 20125331 (-)
ENSDARG00000006345	med17	15: 436776 ~ 446010 (+)
ENSDARG00000091727	CABZ01061592.1	15: 3808996 ~ 3816757 (+)
ENSDARG00000078683	NA	15: 3766101 ~ 3804420 (+)
ENSDARG00000036754	hmgn3	23: 31358088 ~ 31372807 (-)
ENSDARG00000099483	vdra	23: 45822935 ~ 45825632 (+)
ENSDARG00000014292	med15	21: 18929319 ~ 18946648 (-)
ENSDARG00000014480	nr6a1b	21: 8198652 ~ 8259645 (+)
ENSDARG00000031848	pparg	11: 609516 ~ 669558 (-)
ENSDARG00000053884	med13a	10: 28029578 ~ 28118035 (-)
ENSDARG00000016496	cdk8	24: 21514283 ~ 21539344 (+)
ENSDARG00000059412	zgc:111976	24: 1023839 ~ 1036384 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE151354 (wild type)	cartilage	baseline	21dpf, wild type	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)	NA	NA	NA
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
GSE158142 (3dpf)	head	baseline	3dpf, untreatment	NA	NA	NA
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000059412

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences