G240188


Basic Information

Item Value
gene id G240188
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 5361861 ~ 5362108 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU272533
GTAATTAATGACAGAATTTTCATTTTTGGGTGAACTAACTCTAAGTTGAAAGTAGCTAAACTTTGAAAAATGGATGGATGGACGGACGGACATCTCGATATCTCGATGGATGGACATCTCACTGAAACATCATTCATGACAGGGTTCGTTGTCTACAAATTAGGGCAGGATTCATTAATAGAAAGCATTCCATTGCTAACATAATATTTTCATTCGAGCATTCTCTCTGCATCTATTCCAAGAAGGCC

Function

NR:

description
PREDICTED: dynactin subunit 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272533 True 248 lncRNA 0.38 1 5361861 5362108

Neighbor

gene id symbol gene type direction distance location
CI01000055_05263543_05300250 TMTC3 coding upstream 61212 5263247 ~ 5300649 (+)
CI01000055_05216403_05221104 NA coding upstream 140691 5216200 ~ 5221170 (+)
CI01000055_05212820_05215358 BORCS5 coding upstream 145718 5211471 ~ 5216143 (+)
CI01000055_05183333_05195895 BTBD10B, BTBD10, BTBD10A coding upstream 165291 5183333 ~ 5196570 (+)
CI01000055_05176060_05176484 NA coding upstream 185228 5175772 ~ 5176633 (+)
CI01000055_05517350_05524400 NA coding downstream 155242 5517350 ~ 5524620 (+)
CI01000055_05565166_05572215 TES coding downstream 203058 5565166 ~ 5572457 (+)
CI01000055_05608414_05611862 CAV2 coding downstream 245398 5607506 ~ 5613775 (+)
CI01000055_05614889_05616453 NA coding downstream 251957 5614065 ~ 5617591 (+)
CI01000055_05630944_05688603 MET coding downstream 268836 5630944 ~ 5688603 (+)
G240183 NA non-coding upstream 16875 5343565 ~ 5344986 (+)
G240182 NA non-coding upstream 28117 5333505 ~ 5333744 (+)
G240181 NA non-coding upstream 28996 5332556 ~ 5332865 (+)
G240180 NA non-coding upstream 29426 5331931 ~ 5332435 (+)
G240179 NA non-coding upstream 33223 5328425 ~ 5328638 (+)
G240199 NA non-coding downstream 49399 5411507 ~ 5411741 (+)
G240201 NA non-coding downstream 103094 5465202 ~ 5465455 (+)
G240202 NA non-coding downstream 104977 5467085 ~ 5467298 (+)
G240207 NA non-coding downstream 113946 5476054 ~ 5514756 (+)
G240099 NA non-coding downstream 163364 5525472 ~ 5544153 (+)
CI01000055_05163240_05166231 PIGY, PYURF other upstream 195214 5162990 ~ 5166647 (+)
CI01000055_04265119_04272728 NA other upstream 1089146 4265119 ~ 4273913 (+)
G239755 NA other upstream 1106769 4254210 ~ 4255092 (+)
G239761 NA other upstream 1148459 4162250 ~ 4213402 (+)
CI01000055_02542526_02542861 NA other upstream 2817743 2542216 ~ 2544118 (+)
CI01000055_06087070_06088629 ETFRF1, LYRM5, LYRM5B other downstream 724717 6087034 ~ 6088759 (+)
G240344 NA other downstream 801752 6163860 ~ 6164011 (+)
CI01000055_06310117_06334586 GRAMD4B, GRAMD4 other downstream 972216 6310117 ~ 6334801 (+)

Expression


Co-expression Network