G240248


Basic Information

Item Value
gene id G240248
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 5548246 ~ 5548471 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU272612
GAACCAGTTAATCAAAGTCTTACTAGGTATACTAAAAAACTTCCAGGCAGGTGTGTTGTGGCAAGTTGGAGCTAATTTCAGCAGGACAGTGGCCCTCCAGGGCCGAGTTTGGACACCCCTGATTTAGGCATTGATAGTGTTGCCAAAGAAATGCATAATTCCCAGTCCGACGACGTAATCAGCTCAGAACGTCACGTGTTGTCATTTTGAAATTACGGTAATTACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272612 True 226 lncRNA 0.45 1 5548246 5548471

Neighbor

gene id symbol gene type direction distance location
CI01000055_05517350_05524400 NA coding upstream 23626 5517350 ~ 5524620 (+)
CI01000055_05263543_05300250 TMTC3 coding upstream 247597 5263247 ~ 5300649 (+)
CI01000055_05216403_05221104 NA coding upstream 327076 5216200 ~ 5221170 (+)
CI01000055_05212820_05215358 BORCS5 coding upstream 332103 5211471 ~ 5216143 (+)
CI01000055_05183333_05195895 BTBD10B, BTBD10, BTBD10A coding upstream 351676 5183333 ~ 5196570 (+)
CI01000055_05565166_05572215 TES coding downstream 16695 5565166 ~ 5572457 (+)
CI01000055_05608414_05611862 CAV2 coding downstream 59035 5607506 ~ 5613775 (+)
CI01000055_05614889_05616453 NA coding downstream 65594 5614065 ~ 5617591 (+)
CI01000055_05630944_05688603 MET coding downstream 82473 5630944 ~ 5688603 (+)
CI01000055_05693578_05697926 FAM185A coding downstream 145043 5693514 ~ 5698294 (+)
G240099 NA non-coding upstream 4093 5525472 ~ 5544153 (+)
G240114 NA non-coding upstream 7814 5537457 ~ 5540432 (+)
G240207 NA non-coding upstream 33490 5476054 ~ 5514756 (+)
G240202 NA non-coding upstream 80948 5467085 ~ 5467298 (+)
G240201 NA non-coding upstream 82791 5465202 ~ 5465455 (+)
G240249 NA non-coding downstream 1361 5549832 ~ 5550183 (+)
G240250 NA non-coding downstream 1904 5550375 ~ 5550724 (+)
G240251 NA non-coding downstream 2698 5551169 ~ 5552748 (+)
G240252 NA non-coding downstream 7175 5555646 ~ 5556676 (+)
G240254 NA non-coding downstream 9146 5557617 ~ 5557831 (+)
CI01000055_05163240_05166231 PIGY, PYURF other upstream 381599 5162990 ~ 5166647 (+)
CI01000055_04265119_04272728 NA other upstream 1275531 4265119 ~ 4273913 (+)
G239755 NA other upstream 1293154 4254210 ~ 4255092 (+)
G239761 NA other upstream 1334844 4162250 ~ 4213402 (+)
CI01000055_06087070_06088629 ETFRF1, LYRM5, LYRM5B other downstream 538354 6087034 ~ 6088759 (+)
G240344 NA other downstream 615389 6163860 ~ 6164011 (+)
CI01000055_06310117_06334586 GRAMD4B, GRAMD4 other downstream 785853 6310117 ~ 6334801 (+)

Expression


Co-expression Network