G242678


Basic Information

Item Value
gene id G242678
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000056
NCBI id null
chromosome length 2086016
location 1054421 ~ 1054746 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU275452
ACTGTACTCTGTAAGTTAATTATTATGGGTGACAAGCATATACTTTTTTAGTTTAGTTACTTTACTTGTGGCCTATTCACTGTGGACATGAAAGACAATGCTTTATTTACAAACTCATGAGACTTGGATGGAAGAGGCTCCACTTTTGTCACTTTTGACTAATCTAACTAATCTTAGCACTGAGGCCGTTCATGAGTCTGTCCCCAAAATGAGAAGTCCATGGTTATACATGAACAAGAAAAATTCCTAAAAAAAATTTTCCTTACCGATTACAGCACACAATTAGCAATGTATAAATATAAATTTATTGGGGCGGATTAGGGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU275452 True 326 lncRNA 0.36 1 1054421 1054746

Neighbor

gene id symbol gene type direction distance location
CI01000056_00601216_00610322 TBL1XR1.S, TBL1XR1A, TBL1XR1, TBL1XR1.L coding upstream 444016 600353 ~ 610405 (+)
CI01000056_00376962_00378136 ARPC4 coding upstream 675913 376962 ~ 378508 (+)
CI01000056_00349501_00362980 RAB7A, RAB7 coding upstream 691441 349501 ~ 362980 (+)
CI01000056_00256621_00277009 LRIG1 coding upstream 776026 256447 ~ 278395 (+)
CI01000056_00233785_00245058 NA coding upstream 809003 233546 ~ 245418 (+)
CI01000056_01059066_01060580 NA coding downstream 4320 1058889 ~ 1062844 (+)
CI01000056_01306290_01314471 NA coding downstream 251130 1305876 ~ 1314626 (+)
CI01000056_01714213_01714936 NA coding downstream 659196 1713942 ~ 1714975 (+)
CI01000056_01720495_01737951 RBMS1A coding downstream 665749 1720495 ~ 1738749 (+)
CI01000056_01749027_01767554 ITGB6 coding downstream 694130 1748876 ~ 1767853 (+)
G242677 NA non-coding upstream 203 1053976 ~ 1054218 (+)
G242676 NA non-coding upstream 612 1053529 ~ 1053809 (+)
G242675 NA non-coding upstream 1038 1053158 ~ 1053383 (+)
G242663 NA non-coding upstream 22772 1031423 ~ 1031649 (+)
G242662 NA non-coding upstream 24067 1029938 ~ 1030354 (+)
G242740 NA non-coding downstream 127636 1182382 ~ 1182669 (+)
G242867 NA non-coding downstream 420700 1475446 ~ 1475650 (+)
G242947 NA non-coding downstream 553849 1608595 ~ 1609136 (+)
G242948 NA non-coding downstream 554833 1609579 ~ 1609867 (+)
G242949 NA non-coding downstream 555429 1610175 ~ 1610428 (+)
G241982 NA other upstream 893471 155068 ~ 160950 (+)

Expression


Co-expression Network