Gene
RNA
| Item | Value |
|---|---|
| gene id | G242677 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000056 |
| NCBI id | null |
| chromosome length | 2086016 |
| location | 1053976 ~ 1054218 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU275451 | True | 243 | lncRNA | 0.38 | 1 | 1053976 | 1054218 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000056_00601216_00610322 | TBL1XR1.S, TBL1XR1A, TBL1XR1, TBL1XR1.L | coding | upstream | 443571 | 600353 ~ 610405 (+) |
| CI01000056_00376962_00378136 | ARPC4 | coding | upstream | 675468 | 376962 ~ 378508 (+) |
| CI01000056_00349501_00362980 | RAB7A, RAB7 | coding | upstream | 690996 | 349501 ~ 362980 (+) |
| CI01000056_00256621_00277009 | LRIG1 | coding | upstream | 775581 | 256447 ~ 278395 (+) |
| CI01000056_00233785_00245058 | NA | coding | upstream | 808558 | 233546 ~ 245418 (+) |
| CI01000056_01059066_01060580 | NA | coding | downstream | 4848 | 1058889 ~ 1062844 (+) |
| CI01000056_01306290_01314471 | NA | coding | downstream | 251658 | 1305876 ~ 1314626 (+) |
| CI01000056_01714213_01714936 | NA | coding | downstream | 659724 | 1713942 ~ 1714975 (+) |
| CI01000056_01720495_01737951 | RBMS1A | coding | downstream | 666277 | 1720495 ~ 1738749 (+) |
| CI01000056_01749027_01767554 | ITGB6 | coding | downstream | 694658 | 1748876 ~ 1767853 (+) |
| G242676 | NA | non-coding | upstream | 167 | 1053529 ~ 1053809 (+) |
| G242675 | NA | non-coding | upstream | 593 | 1053158 ~ 1053383 (+) |
| G242663 | NA | non-coding | upstream | 22327 | 1031423 ~ 1031649 (+) |
| G242662 | NA | non-coding | upstream | 23622 | 1029938 ~ 1030354 (+) |
| G242661 | NA | non-coding | upstream | 33346 | 1020312 ~ 1020630 (+) |
| G242678 | NA | non-coding | downstream | 203 | 1054421 ~ 1054746 (+) |
| G242740 | NA | non-coding | downstream | 128164 | 1182382 ~ 1182669 (+) |
| G242867 | NA | non-coding | downstream | 421228 | 1475446 ~ 1475650 (+) |
| G242947 | NA | non-coding | downstream | 554377 | 1608595 ~ 1609136 (+) |
| G242948 | NA | non-coding | downstream | 555361 | 1609579 ~ 1609867 (+) |
| G241982 | NA | other | upstream | 893026 | 155068 ~ 160950 (+) |
