Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000057_01711126_01748095 |
| gene name | MAPK14, MAPK14A, P38B, P38A, MAPK14B |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 1711126 ~ 1748495 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| mapk14a | Enables MAP kinase activity. Involved in cellular response to UV; embryonic cleavage; and p38MAPK cascade. Acts upstream of or within regulation of collateral sprouting in absence of injury; regulation of protein stability; and somitogenesis. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including digestive system; immature eye; nervous system; otic vesicle; and pronephric duct. Orthologous to human MAPK14 (mitogen-activated protein kinase 14). |
| mapk14b | Predicted to enable MAP kinase activity. Predicted to be involved in several processes, including p38MAPK cascade; positive regulation of cell differentiation; and positive regulation of myoblast fusion. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human MAPK14 (mitogen-activated protein kinase 14). |
| mapk14 | Enables MAP kinase activity; mitogen-activated protein kinase p38 binding activity; and protein phosphatase binding activity. Involved in several processes, including cellular response to lipoteichoic acid; negative regulation of hippo signaling; and regulation of cytokine production. Acts upstream of or within cellular response to lipopolysaccharide. Located in cytosol and nuclear speck. |
| p38a | Enables MAP kinase activity. Involved in several processes, including defense response to other organism; paracrine signaling; and positive regulation of cell size. Located in nucleus. Is expressed in adult head; embryonic midgut chamber; embryonic primordium of adult hindgut precursor; embryonic/larval midgut; and organism. Orthologous to human MAPK11 (mitogen-activated protein kinase 11). |
| p38b | Enables MAP kinase activity. Involved in several processes, including animal organ morphogenesis; defense response to other organism; and regulation of signal transduction. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including embryonic/larval brain; embryonic/larval muscle system; extended germ band embryo; and gut section. Orthologous to several human genes including MAPK14 (mitogen-activated protein kinase 14). |
| id | name | namespace |
|---|---|---|
| GO:0090336 | positive regulation of brown fat cell differentiation | biological_process |
| id | description |
|---|---|
| K04441 | P38; p38 MAP kinase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000057_01711126_01748095.mRNA | True | 1518 | mRNA | 0.48 | 12 | 1711126 | 1748495 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_01697652_01698656 | B3GALT6 | coding | upstream | 12109 | 1697652 ~ 1699017 (+) |
| CI01000057_01673559_01688208 | HIPK1 | coding | upstream | 21844 | 1671911 ~ 1689282 (+) |
| CI01000057_01662304_01670233 | NA | coding | upstream | 40546 | 1660369 ~ 1670580 (+) |
| CI01000057_01614455_01629013 | NA | coding | upstream | 81991 | 1614455 ~ 1629135 (+) |
| CI01000057_01553214_01557764 | TP53RK | coding | upstream | 153209 | 1553140 ~ 1557917 (+) |
| CI01000057_01780001_01798256 | SRPK1, SRPK1B | coding | downstream | 31506 | 1780001 ~ 1798647 (+) |
| CI01000057_01859686_01900493 | KIF21B | coding | downstream | 111191 | 1859686 ~ 1901066 (+) |
| CI01000057_01926510_01929865 | NA | coding | downstream | 178015 | 1926510 ~ 1930024 (+) |
| CI01000057_02043653_02103160 | NA | coding | downstream | 295008 | 2043503 ~ 2103654 (+) |
| CI01000057_02126499_02142817 | TIMELESS, TIMELESSA, TIMELESS.S | coding | downstream | 378004 | 2126499 ~ 2143124 (+) |
| G243740 | NA | non-coding | upstream | 1650 | 1704632 ~ 1709476 (+) |
| G243733 | NA | non-coding | upstream | 58135 | 1582950 ~ 1652991 (+) |
| G243761 | NA | non-coding | upstream | 135574 | 1575119 ~ 1575552 (+) |
| G243760 | NA | non-coding | upstream | 136869 | 1574058 ~ 1574257 (+) |
| G243757 | NA | non-coding | upstream | 145407 | 1565412 ~ 1565719 (+) |
| G243797 | NA | non-coding | downstream | 357202 | 2105697 ~ 2111516 (+) |
| G243837 | NA | non-coding | downstream | 379995 | 2128490 ~ 2129226 (+) |
| CI01000057_02198818_02199189 | NA | non-coding | downstream | 450093 | 2198588 ~ 2199305 (+) |
| G243850 | NA | non-coding | downstream | 460440 | 2208935 ~ 2209242 (+) |
| CI01000057_02228717_02239180 | NA | non-coding | downstream | 479403 | 2227799 ~ 2239358 (+) |
| G243558 | NA | other | upstream | 752755 | 956063 ~ 958371 (+) |
| G243557 | NA | other | upstream | 755931 | 954843 ~ 955195 (+) |
| CI01000057_00417827_00418207 | NA | other | upstream | 1290616 | 417700 ~ 418655 (+) |
| CI01000057_02395285_02396439 | NA | other | downstream | 646103 | 2394598 ~ 2396561 (+) |
| G243975 | NA | other | downstream | 827958 | 2576453 ~ 2576852 (+) |
| G243991 | NA | other | downstream | 886742 | 2635237 ~ 2652560 (+) |
| G245231 | NA | other | downstream | 1338601 | 3087096 ~ 3292562 (+) |
| G245401 | NA | other | downstream | 1789074 | 3537569 ~ 3538442 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|
