Gene
RNA
| Item | Value |
|---|---|
| gene id | G245567 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 4237738 ~ 4238188 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU278753 | True | 451 | lncRNA | 0.41 | 1 | 4237738 | 4238188 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_04218508_04219283 | GA45B, GADD45B, GADD45BA | coding | upstream | 17844 | 4218334 ~ 4219894 (+) |
| CI01000057_04202045_04205390 | VMAC | coding | upstream | 32259 | 4201772 ~ 4205479 (+) |
| CI01000057_04105710_04123101 | RANBP3A, RANBP3 | coding | upstream | 114020 | 4105710 ~ 4123718 (+) |
| CI01000057_04088057_04092278 | CTNS | coding | upstream | 145460 | 4088057 ~ 4092278 (+) |
| CI01000057_04029208_04038844 | SLC1A6 | coding | upstream | 198828 | 4029208 ~ 4038910 (+) |
| CI01000057_04357565_04358136 | NA | coding | downstream | 119377 | 4357565 ~ 4359044 (+) |
| CI01000057_04364304_04364681 | NA | coding | downstream | 125766 | 4359098 ~ 4365796 (+) |
| CI01000057_04419591_04430486 | PDE4C, CRTC1B | coding | downstream | 181403 | 4419591 ~ 4430486 (+) |
| CI01000057_04443549_04450402 | RAB3A, RAB3A.L, RAB3AB | coding | downstream | 205361 | 4443549 ~ 4451138 (+) |
| CI01000057_04473417_04481843 | KLHL26 | coding | downstream | 235034 | 4473222 ~ 4481894 (+) |
| G245562 | NA | non-coding | upstream | 6055 | 4231449 ~ 4231683 (+) |
| G245473 | NA | non-coding | upstream | 28800 | 4207939 ~ 4208938 (+) |
| G245550 | NA | non-coding | upstream | 37280 | 4200238 ~ 4200458 (+) |
| G245539 | NA | non-coding | upstream | 76388 | 4155797 ~ 4161350 (+) |
| G245526 | NA | non-coding | upstream | 95511 | 4141151 ~ 4142227 (+) |
| G245569 | NA | non-coding | downstream | 1364 | 4239552 ~ 4239760 (+) |
| G245575 | NA | non-coding | downstream | 9287 | 4247475 ~ 4247771 (+) |
| G245580 | NA | non-coding | downstream | 17672 | 4255860 ~ 4256079 (+) |
| G245583 | NA | non-coding | downstream | 22306 | 4260494 ~ 4260818 (+) |
| G245586 | NA | non-coding | downstream | 25037 | 4263225 ~ 4263460 (+) |
| G245486 | NA | other | upstream | 25657 | 4209897 ~ 4212081 (+) |
| CI01000057_03842028_03844033 | NDUFS7.S, MGC85267, NDUFS7 | other | upstream | 393047 | 3842028 ~ 3844691 (+) |
| G245401 | NA | other | upstream | 699296 | 3537569 ~ 3538442 (+) |
| G245231 | NA | other | upstream | 945176 | 3087096 ~ 3292562 (+) |
| G243991 | NA | other | upstream | 1585178 | 2635237 ~ 2652560 (+) |
| G245725 | NA | other | downstream | 860497 | 5098685 ~ 5103606 (+) |
| CI01000057_05564489_05579041 | NA | other | downstream | 1335716 | 5564489 ~ 5579843 (+) |
| G245856 | NA | other | downstream | 1399466 | 5637654 ~ 5643340 (+) |
| G245857 | NA | other | downstream | 1417088 | 5655276 ~ 5657239 (+) |
| CI01000057_05912175_05916639 | NA | other | downstream | 1673625 | 5911767 ~ 5917211 (+) |
