Gene
RNA
| Item | Value |
|---|---|
| gene id | G245464 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 4580465 ~ 4583262 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU278639 | True | 913 | lncRNA | 0.45 | 2 | 4580465 | 4583262 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_04547933_04555967 | RAB43 | coding | upstream | 24477 | 4547757 ~ 4555988 (+) |
| CI01000057_04491831_04508031 | CRTC1 | coding | upstream | 71930 | 4491831 ~ 4508535 (+) |
| CI01000057_04473417_04481843 | KLHL26 | coding | upstream | 98571 | 4473222 ~ 4481894 (+) |
| CI01000057_04443549_04450402 | RAB3A, RAB3A.L, RAB3AB | coding | upstream | 129327 | 4443549 ~ 4451138 (+) |
| CI01000057_04419591_04430486 | PDE4C, CRTC1B | coding | upstream | 149979 | 4419591 ~ 4430486 (+) |
| CI01000057_04601541_04604168 | NA | coding | downstream | 17908 | 4601170 ~ 4604419 (+) |
| CI01000057_04612115_04631293 | RAF1, RAF1B | coding | downstream | 28592 | 4611854 ~ 4631871 (+) |
| CI01000057_04644947_04646881 | NA | coding | downstream | 61685 | 4644947 ~ 4647013 (+) |
| CI01000057_04684204_04698051 | METTL1, METTL1-B | coding | downstream | 100942 | 4684204 ~ 4698051 (+) |
| CI01000057_04703416_04711776 | CYP27B1 | coding | downstream | 120091 | 4703353 ~ 4711933 (+) |
| G245457 | NA | non-coding | upstream | 23452 | 4556709 ~ 4557013 (+) |
| G245479 | NA | non-coding | upstream | 94359 | 4485283 ~ 4486106 (+) |
| G245467 | NA | non-coding | upstream | 122606 | 4455149 ~ 4457859 (+) |
| G245478 | NA | non-coding | upstream | 193137 | 4283935 ~ 4387328 (+) |
| G245644 | NA | non-coding | downstream | 14690 | 4597952 ~ 4598411 (+) |
| G245652 | NA | non-coding | downstream | 70145 | 4653407 ~ 4653646 (+) |
| G245653 | NA | non-coding | downstream | 70521 | 4653783 ~ 4654019 (+) |
| G245654 | NA | non-coding | downstream | 71578 | 4654840 ~ 4655351 (+) |
| G245483 | NA | non-coding | downstream | 116242 | 4699504 ~ 4702148 (+) |
| G245486 | NA | other | upstream | 368384 | 4209897 ~ 4212081 (+) |
| CI01000057_03842028_03844033 | NDUFS7.S, MGC85267, NDUFS7 | other | upstream | 735774 | 3842028 ~ 3844691 (+) |
| G245401 | NA | other | upstream | 1042023 | 3537569 ~ 3538442 (+) |
| G245231 | NA | other | upstream | 1287903 | 3087096 ~ 3292562 (+) |
| G243991 | NA | other | upstream | 1927905 | 2635237 ~ 2652560 (+) |
| G245725 | NA | other | downstream | 515423 | 5098685 ~ 5103606 (+) |
| CI01000057_05564489_05579041 | NA | other | downstream | 990642 | 5564489 ~ 5579843 (+) |
| G245856 | NA | other | downstream | 1054392 | 5637654 ~ 5643340 (+) |
| G245857 | NA | other | downstream | 1072014 | 5655276 ~ 5657239 (+) |
| CI01000057_05912175_05916639 | NA | other | downstream | 1328551 | 5911767 ~ 5917211 (+) |
