CI01000059_00691603_00693842


Basic Information

Item Value
gene id CI01000059_00691603_00693842
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 690594 ~ 694074 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_00691603_00693842.mRNA
ATATATAAAGCCTAATATTATATGTACCTATGTTTAAATAGGCATGATTTCGCCTCTGTTTTATAAAATGGACACTTTTTATGCACAACTTGTTTGCTTTTACAACTTTGTTGGTAAAAAAAATTGTTACTTTAGAAATATCATTGCTATATTGTAGCATTGACAACAAGTTTATGCGACCCTCAATGTTTCTGTGTGTTTAGAATTGTCTCAGTGTGTGTGAGAGTTAAGGAGGTGCATTAATTCAGAACAGCGATTAAACTGACGTGAACTGTTTATTCAACAGTTTGAACACACACCTTCCAGCCAAATATAAAGGCACACCCTCTTCTACTTTGATCAGGTCATAAATACCACCCAATGGTCTCACTACCTCTATAATTAGTCATGTCCAGCAAGATAAACTTAAAATGAAATTATTTACTATAGATCAGTGGTGACATTAATATGTGACAGTGTTGTAGTAGTAGTGGTGGTGAAAGTGGTTTTGTGACATTATAATATTAATTAAAACAAACAAACAAACAAAAAAAAAAAACAATTCAATTTGTTTTATCTGGTGTATTTGCAGTTTGCAGACCCATAGTGTAGGAACCACCTTTTACCTTTGGCCTTTCAGTATGCTTAAAGGGATAGTTCACCCAAAAATGAAAATTCTATCATAATTTCCTCACCTTTAAGTTGTCCCACTTTTCTGAATCAAATTTGAACCTAAATATTTGAGGGTACAATGTGGACATTTGCCATAAATAAACAAATGTTGTTATGGATGTGCTAAATGGACCCATACTGGCTGTTCTAGTTACATTCTGAGATAACCGTACTACTGTTTAGGGCAAGGGAAACAACCCATTTTCCTCTAATCATACAGAAAACCATTGTTGGGATGGGAAGTTTTTGCTGAATATAGGAAGTTACTGAAGAGAAGTTACTGCTTTTAAATAGTTCCTCTATTTTATCTATATATTTGAATGAAGAGGAGACATTGTTCTCTTCTGTCCTGTAAACTATGGAGAGGCATTTTGTTTTTTACATGTTATGTTACACTATTCTGTTTCACTTTTTAACCCATAATGAAGCAACACCATGGGCTAAGAGACAATGTCAACAGATAGCTAATGGCTATGATTGTAGTGATATGGACCTACAATTCATTCCAGATGAGGTACCAAATTCTGTCCAAATTTTTAAATTTAGCTTCAACTACCTGCCGGCCCTATACAACTTCACTTTTCAGAGGCTAAATAACTTGCATTCGTTAGACCTGACAAGATGTGGCATCACTTTCATGTATGAAGACATTTTTATACATCAGCCTGACTTGGAGGTCCTAATCCTAATTGGAAACCCACTCGTGTTCATCGCAGGTAGAGCTTTTTCTGGACCACTAGCATTGAAATATCTCAGCCTAACTCAGTCAAAAATCAAAAGCCTATCAGACATCCCATCAGAAAATCTTGCATATTTGGAGGTTCTGGAGCTTGGGGGAAGTGGCATTCGCTCATTAGATGGACTAAGTAATTTCCACTGGCAAAACTTGAAGAGCCTGCAGCTGGAAATGAACTCTATAGACCGGATAAATCTGACTGACTTACAACCAATTCACAATGTGGTCGGAATGAGCATCAGCTTCAAAGGAAACGATTTTGTCAATATAGAACCAGGTGCTTTTAAGTCACTGAACTTGAGTAGTCTTGACTTCAGTGGCTGCTTCAGCAAAATGACTTTCTCCTCCGTACTGAGAGGGCTTGAAGGCATTAAAACCAACAAACTGAAGCTGGGATTGTATGAAACCGATCCAAATGTGCACATACCATCAGCTGCTCTACAATCTTTTTGCAAGATCACCGTTACTGACCTAGATTTCCAGCTTCAGCATTTCTTAGACCTAAATAATTCTACATTTCATTGCCTTGAAGGGCTTAAAAAGCTTGACCTTACCAGAGCCCACCTGGATTCATTGACCTTTAACATGACTGGCCTGTCCACCTTGTCCCATCTGGTGCTAGATGAGAATAGATTTTCAGATGTCTGCCACATCAACACCGGAATCTTTTCTGTGCTTACGCACTTGTCCGTGAGCGGGAACGCGAAGCAACTCGGATTCAGCAATGGATGCTTGGAGAGTCTCAGAGTCCTAGAGGAGCTGGATCTCAGTCTTAGTTTAGTAAAACCAATAGGACCCTGTTGTAATGACCAGCTGTTTGGTTTGGGTGAGCTGAAGCTCCTCAATCTCAGCTATAGCTCACCAATGATCTGGAGTTCACAGCCTTTCAGTGCGACTCCACAGCTGGAGCACTTGGACTTCAGCTATTCACTCTACACTCTGAACGACAGCTCACCATTCAGCAATCTACAAAGTCTCCGAACTCTAAATCTTTCCTGGTCAAATACAAATCTGACAAATATACACATCTTCAATGGCTTGAAAACCTTACAACTCCTCAATTTGAAGGGAAACCCCATTCAAGGGGGGGTTCTTACAGAGACAGAGCTCTTTAAATCTGTCCCTCTTTTGGAAACCCTCATTCTATCTTCATGTAAAATAACTGCCTTTGAAGAGAACTTGTTTAAAGGCCTCACACATCTCAGGCAAGTAGATCTGAGTGAAAACAAGCTTGTCAAATTGAGCACTTCAGGATTTTACTCCCTGGAGTTTCTCCAACTTAACTTTGCCAGTAATGCCATTGTGATAGTGGATGTTGGAAGTGTCATGAATTTGGGAAAAGAAAGTACTGTTGATCTGAGCTACAATCCCCTAGCATGCAACTGTAGCAACATTCAGTTCATCAACTGGGTAAAGAAAAACACAATCAAAGTAAAACACTTAATGGAGACAGTTTGTAATGCTACAAGAACAAGGATTATTGATGCTAAACTTCAGTGTGGATTCCCTGTTGGTGTACTTGCATTTGTTATAATTCTAATTGTGATTGTAATTGCATCTGCCATTTTTTGCCTTGTGAGGAGAATTAGAAGTTATTCAAGATACACACAGCTGTAAATTCAGACGTTTGTTTGGGCTCCCTTCTAATGTGGGCTACTCAAATATAACATTAATGTTTGCTTTAAGTTGGAGATAAAAGTTGGCTACTGACAGCATTAAAGCCTTTAAAAAATTTTGAAATTCAGAGTTTTTAAATAACAGATATAGGTCTAATGTCCCTTTTCAATCTTGTTAACTACCTTGATTATTTTGTTTGAGATGTTTAAAGTAATTTAGAAGCAAAAGGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_00691603_00693842.mRNA True 3236 mRNA 0.38 3 690594 694074

Neighbor

gene id symbol gene type direction distance location
CI01000059_00490117_00490491 PMCHL coding upstream 199985 490019 ~ 490609 (+)
CI01000059_00396907_00442561 NPR2 coding upstream 247116 396184 ~ 443478 (+)
CI01000059_00381312_00393910 ANAPC2 coding upstream 296609 381038 ~ 393985 (+)
CI01000059_00341223_00367666 TPRN coding upstream 322730 341223 ~ 367864 (+)
CI01000059_00338849_00339271 TMEM203 coding upstream 350978 338849 ~ 339616 (+)
CI01000059_00855742_00857391 NA coding downstream 161500 855574 ~ 857391 (+)
CI01000059_00892927_00916862 TMC2A, TMC1, TMC2 coding downstream 198853 892927 ~ 918225 (+)
CI01000059_00920512_00932905 NA coding downstream 226200 920274 ~ 933233 (+)
CI01000059_00933745_00937663 ANXA1C coding downstream 239374 933448 ~ 937750 (+)
CI01000059_00944348_00984424 PCSK5A coding downstream 250274 944348 ~ 984874 (+)
G250884 NA non-coding upstream 23767 666585 ~ 666827 (+)
G250847 NA non-coding upstream 141783 548589 ~ 548811 (+)
G250846 NA non-coding upstream 144882 545339 ~ 545712 (+)
G250812 NA non-coding upstream 175349 459193 ~ 515245 (+)
G250797 NA non-coding upstream 255400 434289 ~ 435194 (+)
G250904 NA non-coding downstream 29 694103 ~ 696167 (+)
G250917 NA non-coding downstream 24952 719026 ~ 720103 (+)
G250919 NA non-coding downstream 31669 725743 ~ 769235 (+)
G250994 NA non-coding downstream 192721 886795 ~ 887077 (+)
G251035 NA non-coding downstream 244110 938184 ~ 939094 (+)
G251046 NA other downstream 284667 978741 ~ 979218 (+)
G251017 NA other downstream 370795 1056252 ~ 1067357 (+)
G251249 NA other downstream 933692 1627766 ~ 1661390 (+)
CI01000059_02068570_02070710 NA other downstream 1374470 2068544 ~ 2071924 (+)
CI01000059_02133197_02134625 NA other downstream 1437418 2133003 ~ 2135347 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_030471 cd180 coding NC_007116.7 CM002889.2 54938634 ~ 54941004 (+)