CI01000059_00933745_00937663 (ANXA1C)


Basic Information

Item Value
gene id CI01000059_00933745_00937663
gene name ANXA1C
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 933448 ~ 937750 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_00933745_00937663.mRNA
GAATAAAAGACAGGTTCTGTTCCTGAAATTATCCATTTCAGAACAGCTTTACAGACTTCACAGAGGAACAAGTGAGTTATCTTTTTAAATGCATTTAACTGCATGTCCTCTACTATAGCTTGTCATTATTAATGTGCAACGTGTCTTAATGATTCTATATTCATAATTGAGCAATGTACAACTGATGGAATTGATATGACAATCTAGATTTACATATCTGGAGAATGTTTGCAATGACTGGTCATAAGCTCATCCTTATGCATTTGCTCTGTTCTTAGCTTCTTCAAAGCTCGCAAGATGGCTTTTTTGCAGCAACTTTTCCAGCAAAGTAATGATGACAAGGGTTTTAAAGCTGCTCCTGCTGTTGAGACAGGATACTTTGGAACAGTCAAGACTGATCCAAACTTTAATGCCCAGAATGATGCTGCAAAATTAAAGAAAGCCATTGAGACCAAAGGTGTGGATGAAGCCACTATTGTGGAGGTTCTAGCAAAGAGGAGCAATTCACAAAGACAACAGATCAAAGCAGCTTATCAGCAGAGTGCAGGAAAACCTCTGGCAGATGATTTGAAAAAGGCTCTGAAGTCAGATTTTGAGGAGGTGGTCCTGGCTTTGCTGATGACACCGCCTGAGTATGATGCTTTTGAAATGAAAAGAGCTATGAAGAATCTTGGGACAAATGAGAATGTCCTAAGTGAAATTCTGGGGACCAGATCAAACAAGGAGATTACAGCATTGAAGAATACTTTCAAAGAAGTCTATGGAGAGATGCTGGAGGAAGATATTAAATGTGAAGTTAAAGGACATCTTGAGACTACCCTAGTTGCCCTTTGCAAGGCTACCAGGAGTGAAGACCGTAACATTGATGATGGAGTGGCTAAGAGTGATGCAAAGGCTCTGTTTGAGGCAGGAGAGAATCGGCTTGGCACTGTTTGTTCTGTTCTGATTGACATTCTCACAAACAGGAGTGAAGCTCAGTTGTGCAAAATTTTCCAATATTATGGCCAACTTAGCAAAGACGGTTTGGCCAAAGATCTGGAGGTAAAATCTGCTTGGAACAAACCTGCCTACTTTGCAGAAAAGCTCCACCTGGCAATGAAGGGACTGGGAACCAACACTGACACACTAACTAGAATCATTGTGAGTCGTTCAGAAATTGACCTGCTGAAAATCATTCAAGAGTACAAGAGGATGTATGGCAAAACCCTTCAGGAGGCCATTCTGAAGGAAACAAGTGGAGATTATGAAAAGATCCTGCTGGCTCTCTGTGGCACTCAATAAACACATCTGTTAGTTGATTATGGGGCGTATGCATGACCCATGTAAACACTTAATCTCCTCAGGGTGTGGCTCTTCAGGAGTGTTTCA

Function

symbol description
anxa1c Predicted to enable calcium ion binding activity; calcium-dependent phospholipid binding activity; and phospholipase A2 inhibitor activity. Predicted to be involved in several processes, including animal organ development; regulation of T cell activation; and regulation of cell migration. Predicted to be located in several cellular components, including basolateral plasma membrane; cilium; and lateral plasma membrane. Predicted to be active in cytoplasm; extracellular space; and plasma membrane. Is expressed in EVL and periderm. Human ortholog(s) of this gene implicated in brain ischemia and pancreatic cancer. Orthologous to human ANXA1 (annexin A1).

NR:

description
Annexin A1a

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_00933745_00937663.mRNA True 1368 mRNA 0.41 12 933448 937750

Neighbor

gene id symbol gene type direction distance location
CI01000059_00920512_00932905 NA coding upstream 215 920274 ~ 933233 (+)
CI01000059_00892927_00916862 TMC2A, TMC1, TMC2 coding upstream 15223 892927 ~ 918225 (+)
CI01000059_00855742_00857391 NA coding upstream 76057 855574 ~ 857391 (+)
CI01000059_00691603_00693842 NA coding upstream 239374 690594 ~ 694074 (+)
CI01000059_00490117_00490491 PMCHL coding upstream 442839 490019 ~ 490609 (+)
CI01000059_00944348_00984424 PCSK5A coding downstream 6598 944348 ~ 984874 (+)
CI01000059_01080401_01106181 NTRK2B coding downstream 142085 1079835 ~ 1106239 (+)
CI01000059_01237745_01242859 TMEM150A coding downstream 299995 1237745 ~ 1243197 (+)
CI01000059_01257411_01265603 NA coding downstream 318843 1256593 ~ 1266285 (+)
CI01000059_01293199_01294944 FZD9B, FZD9 coding downstream 355121 1292871 ~ 1295299 (+)
G250994 NA non-coding upstream 46371 886795 ~ 887077 (+)
G250919 NA non-coding upstream 164213 725743 ~ 769235 (+)
G250917 NA non-coding upstream 213345 719026 ~ 720103 (+)
G250904 NA non-coding upstream 237281 694103 ~ 696167 (+)
G250884 NA non-coding upstream 266621 666585 ~ 666827 (+)
G251035 NA non-coding downstream 434 938184 ~ 939094 (+)
G251051 NA non-coding downstream 76209 1013959 ~ 1014232 (+)
G251052 NA non-coding downstream 77542 1015292 ~ 1015574 (+)
G251055 NA non-coding downstream 85425 1023175 ~ 1023375 (+)
G251057 NA non-coding downstream 86416 1024166 ~ 1024379 (+)
G251046 NA other downstream 40991 978741 ~ 979218 (+)
G251017 NA other downstream 127119 1056252 ~ 1067357 (+)
G251249 NA other downstream 690016 1627766 ~ 1661390 (+)
CI01000059_02068570_02070710 NA other downstream 1130794 2068544 ~ 2071924 (+)
CI01000059_02133197_02134625 NA other downstream 1193742 2133003 ~ 2135347 (+)

Expression


Co-expression Network