G253509


Basic Information

Item Value
gene id G253509
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 4529083 ~ 4529292 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU287728
TTTCATTTTTGGGTGAACTAACCCCTTTAAGGCCTGTTCCACAGGTGCGTGTGCAATAATTGTTAATGGTTCACTGAACGAGCATGAAAAACAGTGTTTAAACACTTTCCAATAATGATATGTAATGCTTATTTGGATTTTACAAAATTATCTTTAAAAGAGAGTATCAAAAAAGGACTTTTCTTTTTCTTTCTATTTTTCTTTTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU287728 True 210 lncRNA 0.30 1 4529083 4529292

Neighbor

gene id symbol gene type direction distance location
CI01000059_04479563_04499562 GATSL2, GATSL2.L coding upstream 28655 4479083 ~ 4500428 (+)
CI01000059_04472236_04475254 NA coding upstream 53350 4471743 ~ 4475733 (+)
CI01000059_04427836_04462926 DOC2A, DOC2B coding upstream 66128 4427836 ~ 4462955 (+)
CI01000059_04381041_04393828 NA coding upstream 135036 4380956 ~ 4394047 (+)
CI01000059_04337486_04338454 NA coding upstream 189366 4336934 ~ 4339717 (+)
CI01000059_04533856_04536270 RPO2J, POLR2J, POLR2J.S, POLR2J2, POLR2J3 coding downstream 4237 4533529 ~ 4536388 (+)
CI01000059_04537580_04540637 ALKBH4 coding downstream 8288 4537580 ~ 4540818 (+)
CI01000059_04542374_04554071 NA coding downstream 13082 4542374 ~ 4554926 (+)
CI01000059_04558576_04590484 BCKDK coding downstream 29284 4558576 ~ 4590721 (+)
CI01000059_04597371_04601178 ORAI2, ORAI1.S, ORAI1 coding downstream 68035 4597327 ~ 4601347 (+)
G253506 NA non-coding upstream 13247 4480684 ~ 4515836 (+)
G253504 NA non-coding upstream 58568 4470270 ~ 4470515 (+)
G253482 NA non-coding upstream 104033 4385446 ~ 4425050 (+)
G253380 NA non-coding upstream 116370 4395203 ~ 4412713 (+)
G253377 NA non-coding downstream 72486 4601778 ~ 4602016 (+)
G253369 NA non-coding downstream 72837 4602129 ~ 4603851 (+)
G253383 NA non-coding downstream 77488 4606780 ~ 4607960 (+)
G253548 NA non-coding downstream 152383 4681675 ~ 4682157 (+)
G253554 NA non-coding downstream 165401 4694693 ~ 4694908 (+)
G252732 NA other upstream 1325992 3202739 ~ 3203091 (+)
CI01000059_02133197_02134625 NA other upstream 2393905 2133003 ~ 2135347 (+)
CI01000059_02068570_02070710 NA other upstream 2457159 2068544 ~ 2071924 (+)
G251249 NA other upstream 2867693 1627766 ~ 1661390 (+)
G251017 NA other upstream 3461726 1056252 ~ 1067357 (+)
G253654 NA other downstream 708467 5237759 ~ 5238233 (+)
G254692 NA other downstream 1730751 6260043 ~ 6261633 (+)
G255434 NA other downstream 2915650 7444942 ~ 7450195 (+)
G256046 NA other downstream 3824927 8354219 ~ 8354873 (+)
CI01000059_08640558_08653639 NA other downstream 4102659 8640451 ~ 8654233 (+)

Expression


Co-expression Network