CI01000072_00208491_00215135


Basic Information

Item Value
gene id CI01000072_00208491_00215135
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 207655 ~ 215135 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000072_00208491_00215135.mRNA
GCCTAATGAACAGAGACTTTGAGCTGAAAAATGTGAGGAATAATCCAAAACACTTAGACCACACCAGTGGCACTGGTGCCGCTATGAGCATAGCTGCCAACCGCATCTCATACACATTCAACTTCACTGGCCCCTCACTGTCCATTGATTGTGCCTGCTCCTCATCCCTTGTCGCCCTTCACTTGGCTTGTCAAGCCATAAAACAAGGAGATTGTGATATGGCCTTGTGTGGCGGTGTGACCTGTATTTTGGAGCCGACCATTTTTGTGGCCCTCTCCAAGTCACATATGATCTCCTCTGATGGAATGAGTAAACCTTTCAGCAGCAAAGCAGACGGATATGGCAGAGGTGAAGGATGCGGGGTTGTTCTATTAAAGCCTCTGAAAAAAGCTTTTGAAGACCATGATCATATTTGGGGTATCATCAGCAAAACTGCAGTAAATCAAGATGGCCACACCATTAGTCCAATCACCAAACCATCCATGGTACAGCAGGAGGAGCTTCTTAGAAAAATCTACTCAACAGAGACTGACCTGACTAGTGTCCAGTACATTGAGGCTCATGGAACTGGGACTCCAATTGGAGATCCAATAGAGGCGGGTAGCATCTCAAAAGTCATTGCCAAAGCAAGACCTCAAAAGTCAGGGCCACTCATCATTGGTTCTGTTAAAAGCAATATTGGACACACAGAATCTGCCGCAGGTGTTGCAGGGCTCATTAAGGTTCTTTTGATGATGCAGCATGAAACCATTGTGCCATCATTGTTCTACTCCGTGGAAAACTCCAGCATAGACACTGAATCTCTCAACGTGAAAATCCCCACCACATCAGAAAAATGGATCAGTGACTGCAGAGCAGGGAGATTAGCAGGAATCAATAACTTTGGGTTTGGTGGAACAAATGCACATGCAATTGTCAGACAATATGTGCAGTCAAAAAAGCCAAAAGATCAGCAGATAAGCAAATCCCATCAGTATTTTGTGGTCTCTGCAGCCTCTGAAAAATCCATGAAAAATATTATTGAAGATACTGTAAAACAGATCAGTGCAGGGAAAATATCAGATCTACAGTCTTTACTGTACACATCCGCATGTAGAAGAAGTCACTTGAAACACAAATACAGAAAAGTATTTCAAACATCATCACTGGCAGATCTGCAAGAGAAACTTACTGCTGCTGTAAAGAAAAAGCTTGTACCATCAAAGACAGACTCCAAGCTAGTTTTTGTGTTTTGTGGCAATGGTGTTACATATCAGGGTATGTGCAAGCAGCTCCTAAAACAAGAGCCAGTTTTCAGAGAGGAAATCGTGAAGATTGAAACTCTGTTGCAAAGCTACAGAAGTTTGAATCTGATAGAGGTGCTGGAAAGTGAATCTGAGAAAAGTACAGAGCTGTCTGATCCAAGCATTGTACAGCCTATTCTGTTTGCTATTCAGGTTGCTGTTGTCAAACTTCTGAAACACTGGGGCATCAGTCCTGATGCTGTTTTGGGCCACTCTATTGGAGAAGTCGCTGCATCTCATTGTTCTGGTTTGCTGTCACTTGAAGATGCAGTGAAAGTCATCCACTATCGCAGTTCTTTGCAAAGCACTGTGACAGGAGGGAAGATGCTGGTAGTCAGTAATATGGCTGTTTCTGAAGTCTTGAAAATTCTTCCAACTTGTTCAGGAAGGGTTTGTCTGGCTGCTTATAACAGCCCTCAGTCATGCACCCTCTCAGGAGATGCAGATGACATTGACAGGTTGCAACAGAATTTGAGCAACTCAGCTAGTGGAAAAGATTTGTTCCTTCGCATTTTAGATGTACCTGCAGCATACCACAGTCACAAGATGGATCCCATTTTATCCAAAGTGAAAGAAAGTATAGGCCCATTGCAGGCACATAATTTGGAGACAGAATTGTTCTCAACAGTGACAGGTGTTAGTTTGTGTTCCTCAGATTTTATTACTGGTGAATACTGGGCAAGAAATGTCAGAGAGCCAGTTAAATTTGAACAAGCTGTAAAGTCTGCAGCTAAAAGCAAAAGGACTGTGATATTTGTTGAAATTGGTCCAAGAAGATCTTTGCAGAGGTACATCACTGAGACTCTGGGAAATGACTTCACTGTGATTCCCTCAGTGCAGCCTGATAAAGATCACGAGACAATGCTTGTAGCTGTTTCCAAACTGTTTGAACTTGGGGTCAAAGTGGACTGGGAAATTTTCTATAAAGGTTTTGAGGCTGAACCAATTCCCTACCCACGATACCAGTTTGATGATGTGAAGAAAGATGTCTTCGTTACACGTTTGCAGTCGATCGGCCCCACTGGCAACCATCCAGTAGTTACACAAATGGGTACAGACAGTTCGATGTTCAGCTGTGATTTATCCTCTGAATCAGTGGCCTTCCTGCAAGACCACAAGCACAGTGGGGTTGCCATCATTCCTGGGGCATTTTATGCAGAGTTGGGTTTAGCAACTTACATGGCATATGCAAACCCTAAGGTTCCACTAAGTTCTCTGCAGCTCAGCATAACATTCCAGAGTCCATTTGTTTTCATGCAGAATGCCCCAGATTTGAAAGTACAGCTGGATCATTCAGACCATTTGGCCAATAACACATGTAACTTCAAAATACAGTCTGCTTCTGCAGTCTATGCATTTGGCACAGTAGAAGCAAAACCAGGTAGAAGTCCTGAAGAACAGTTAATTTCATTAGACTGCATTTCCAAAAGATGCACATTCCACATGACTACTGAAGATATCTACAGGCATCTAAGTCAATCAGGATTTGAGTATGGGTCAGTCTTCAGAAATAATGCAGATGTTTACTGTGGGAAAGAATTTAGAGAGGCTATATCTGTTGTGAAGGTCCCAAAGGAATTACTACCTGAATTACATGAGTATCACCTTCACCCTGTGGTCTTGGATTACTTCATGCAACTTGTTCCTGCAACTATAAGGCATGACCTATCAGCAAGACCACAATTTCCTGCACAAATAGGAAGCCTGACTGTATTTGAACCATTGCAAGAGGAGATGTTTGTATATCTGAGAGCAGTACATGTGGAAGAAGATGATATTGACATTTTTGGCTGCTTAACCAACAAACAGGGTAGGGTGTTGGTTGAACTCAGGCATGTGAAAATCAGAATGCTAGGAAGTCATTCCCAAGTGGTCAAGGAGTACTTCTTCCATAACAATTTCAGTATCATCTCTGAAGTTGCCACGTTTGATACACCGATTAAGGCACTTGTCTTTTCTGACCAGGTAGGAATTTCTAAAGCTTTGCAACAGTACTTGGACCCAACATCTAGATATGTGTCTTCTTCAAACAGTAACATACTGTTAAAAGATGGAATTGAACTTCTTTTGTCAAAACTGAAAATTTCAAGTGTAAAGAAAAACTTCCAGGAAATTTTGTTCATGTGGGGCGATGCAGACATAACCTCTCTTGAATCAGAGAAGGTCTTAGACAGTATGGCAGGGTATTGTGAGATTGTCCGAAAGATTGTCAGATATCTTAAGGCACTTTATTTCCCAGGTAATATCAGAGTTATAACCTTTAGGTGCTCTGAGAGCTTAGTGGACCACATAAACATTGGGTTTGTTCTGTCAGGCATGATAAGAGCATGTGCAGCTGAGTTGCCAGAACTTTCCTTCCAGCTGATTGACATGGGCTCTGCCACTTTTGAAGACATCAAAGCTTTGGTTCAGGTCCTCAGATCATACCCCTGTAACAAATATCCAGAGCTAGTAGTGAAGGAGGGCAAAATTCTCAAACCTGAAATCGCCCACACACCTTTGCCAACCATGGCAATCTCTTCAAGAAATGTCCACAAGTTGGATGAAGAAGTCTTCATCTTGCAAACATCTGACCCATATATAATGACAAATGTGTCAGCGACTCAAATGGATAATACCATTGAACTGATTCAAGGAAAAAATATTGAGCTTCATCTCAGTAAAATCTGTGTTCATTCATCAGATTACTTTCCAGTCAGCATTTCTGACCTGAATTATGGTAAGACATTGTACTGGAACAAGCACACAAATGAAAACCATAAGCTCATAGCCCTTGACTTCAGTGGCACTGTCACAGCTGTGGGTAAAGATGTCAGCAAATTTAAAGTTGGTGATCATGTTGTGTCTTGTTACCCTGTTGCTGCCACCACTAAAGTGGTTCTTCCAGCAGCTGTTTGCTGCAAAGCTAAAAGGCTTTCATTCTTGAATGACATGCCTTGTGTCTCTTATATGGTACTGGCTTGGGAGATCTTGCATGAGGCTTTACCCAAAGCTAAACAGCAATGGAAATTGGGTATTTTCTCCACTGTTCCAAACTCAGCTTTGATGAATGTGTTAATTGCTATTGCAAACAGATCAGGTTGGAATGTCAGAGTGAGCACGCAGGCTGATCAGCTGTCTTGTGATTTTAGTGAGGTTGTAGGAGCTGTTCTCCTACCTCCTTATAATTTAGAAACTGCTGAAATAGCTAGCAGTGTTAGAGGCATCAAAGACATTGTTCTTGTCTATGACAACCAGACAGAATTTCCATTCAATACTACAACATTCAGAGGTACAAATGAGGAAGTCCGCTTCCATGCCCTTCTTATGACCCAAATAATGCAAAAAGGGTCTCTGCAAATGCAAATGCCACACATCTACCGTTGGCTGAAATCCATGCATTTGGACAGAAAGTCCTTGTCTTTGGATGCAACAGCTGTTCAAAGAGCGAAATCTCAAGACACTGATCTTCCATCTGTTAAAGAATCTGAATCATACTTCAGATGCCAGATCCTACCCATTATCATCCTGAACAGTGAAGACAAGAACCAGCTGTCTGACATTCCAGCAATGCCCAAACACATTCTATTCAAGAAAAATTCTGTCTATATTGTCACAGGTGGTCTAACAGGGTTGGGCTTTGAAACAGTAAAGTTCATTGCTCAGAAAGGAGGAGGAAACATTGTCATTCTGTCTAGAAGAAATCCAGACCCTCAGATTCAACAAGAGATAAGTCAGGTCAGTAGCAGTTGGGGTTCTGTCATTAAGTCTCTGCCATGTGATGTTTCTGTATTTGAGCAAGTGGACCAGACAATTGTTAATATTGGAAAACTGTTTCCATCCAGTCCCATCAAAGGGATATTTCACAGTGCGGTTGTCCTGCATGATGCGCTGATTGAACATCTTGACAAATCTCTTTATGAGAAAGTTTTGAGGCCAAAAGTACAGGGAGTCATTAACCTTCACCGTGCTACCATACAGTGCAATCTGGATTACTTTGTGTGCTATTCTTCTATCTCTGCCTTCATTGGCAATGCCTCACAAAGTAATTATGCTGCGGCTAATACATTCATGGACACTTTCTGTCAGTACCGTAGAAACATTGGACTTTCTGGACAGTCCATTAATTGGGGGGCTTTGAATCTGGGTCTTTTGTTGAACAAAGTCCAAATCCAAAGATTTCTGGAGGCAAAGGGAATCATGCTTTTGGAGATTCCAGAAATCCATAAAAGTCTTGAGCACTGCCTCTTGATCAACAAACCTCAACAGGTTGTATGCAAATTCAATTTTAAAAACAACTGGAATAACTTTCTCAGTCAGAACAAATCACTAAAGTTGCGGTTGTACAAAATAGGAGAGGAAGCCATGATTAAAACTGGAGTGAACATGTCTAAACCTGAGCAACCCATGACATTATCCTCACCAAGTGATTATCTGAGGTTCATGATTAGCGAAATGATTGGTATTGAGATGGACAAGCTGAATGATGATGTTCATCTTTTTGATTTAGGCATTGACTCAATGCTTGCCATGACTCTGCAGAATCTTATCTTCAATGATAGAGGTGTGAATGTCTCTCTAGTAACTCTGCTGGATCCAAATAGCACACTGGCAACTTTAATTAAAGTCCTGGAGGATAACTGTGTAGATGGATATCAGAGTGAAGAAAGCAATTCCACATACTTTTGATTTGTAAATTGTATTTCTCTAACGCAGACTTGTCTCAAAACAAGGACTTTCTTGGAAATTCATGACATTTTGATGTGAAACAGGAGTATAGTTAGTATTATAGTACATAATTGATCAATTCAATTAACTCAAGTTCATCTAGTTAGTAGTTTATGAAAGTTAATATTGAAAAATAATCCAATATGACTTAATTTCACTAAATTTCCCACCAATCTATTGAAATATTGACTTGCGAGGCAACTCTATCTAACTCCAACTCCTCTGTGTTAACACCACATATCATTAACATAGCAAATTGAGGTTCTGCAGACTGTGCACTTAACATTGTTTATCATTGTTTTAATTTATGTTTTGTTCTTGAGATCACACTAGGTTTAAACACACATTCAGCACTTCACTTCAGTTTCTAAGTTGCTTTCCCTATCTATTTTAATGTACTTGAAAACAAAACTGTATGAGTGGCACATACTGACATGCTGATGATGATTAAGATGGTGATGATTTTTATTATTATTATTATGGTAACACTTTATTTTAGGGTCTTTTAACTAGTTGCTTATTAGCATGCATATTAATAGAATATTGGCCATTTATTAGTACTTATTAAGCACATATTAATGCCTTATTCTGCATAACCTTATTCTACATTCTTAATCCTATCCAATACCTAAACTTAACAACTACCTTACTAACTATTAATAAGCAGTAAATTAGGAGTTTATTGAGGGAAAAGTCATTGTTATTAGTTTATATGTGTTCCCTATACTAAAGTGTTACCATTATTATTATGTTATTATTACAAATATTAAATGAAATCCTTGAAAGTAAGAAATAAA

Function

NR:

description
novel protein containing a beta-ketoacyl synthase, N-terminal domain, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000072_00208491_00215135.mRNA True 6787 mRNA 0.40 3 207655 215135

Neighbor

gene id symbol gene type direction distance location
CI01000072_00178958_00188889 NA coding downstream 18766 178879 ~ 188889 (-)
CI01000072_00153905_00173611 NA coding downstream 33465 153335 ~ 174190 (-)
CI01000072_00099537_00100614 NA coding downstream 107037 99168 ~ 100618 (-)
CI01000072_00235619_00238502 NA coding upstream 19734 234869 ~ 238502 (-)
CI01000072_00270378_00272531 NA coding upstream 55052 270187 ~ 272677 (-)
CI01000072_00281180_00284855 NA coding upstream 65568 280703 ~ 285182 (-)
CI01000072_00326699_00334092 SLC46A1 coding upstream 110200 325335 ~ 334595 (-)
CI01000072_00353460_00366394 SLC46A1 coding upstream 138131 353266 ~ 366583 (-)
G283873 NA non-coding downstream 5281 201959 ~ 202374 (-)
G283844 NA non-coding downstream 56466 148162 ~ 151189 (-)
G283868 NA non-coding downstream 67199 140164 ~ 140456 (-)
G283866 NA non-coding downstream 75374 132053 ~ 132281 (-)
G283881 NA non-coding upstream 8285 223420 ~ 224235 (-)
G283888 NA non-coding upstream 16717 231852 ~ 232294 (-)
G283845 NA non-coding upstream 25467 240602 ~ 243906 (-)
G283896 NA non-coding upstream 36706 251841 ~ 252191 (-)
G283914 NA non-coding upstream 58797 273932 ~ 274259 (-)
G285534 NA other upstream 1120372 1335507 ~ 1354932 (-)
CI01000072_01596829_01610605 NA other upstream 1378976 1594111 ~ 1627895 (-)
G285766 NA other upstream 1790416 2005551 ~ 2008309 (-)
G285752 NA other upstream 1952913 2168048 ~ 2170658 (-)

Expression


Co-expression Network