CI01000072_00235619_00238502


Basic Information

Item Value
gene id CI01000072_00235619_00238502
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 234869 ~ 238502 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000072_00235619_00238502.mRNA
GAACGCATCTTTCAAAGCACTCATCAAGTCCCCAGTAGCCGCTCTAAAGCCGTCATTTGCTACATTCTCCCATGCTGGGTGTTTTTGCTTGCTGTCTGCGGTGGGGACTCTACCACTCACTTTATGCCATCTAAGTTTGTGCCACTACCATTCTTTTTGATGATTCCAGTGGTGTCACTCCTGGACCCCAGCGGTCGGCCCCTCATCTCTCAAGTTTGCGAGGTAGGGCTGGAACGGTTCCAGGAGGATCAGTCACCATCCGCTCTCAGGTCCAAGAGGGACATCCAAGGAATCCTGCCGACTACGTCAAATTGGACCAAAAGGATTCTACAGTGGCACAGACACTATGGGAAAAGTATTTTATCCACTGTGGCCTTCCAGCTTGAATACACTCAGACCAGGGCAGGGATTTTGAGGGCCGGTGATCCTCATCTGGAGAGGTTCAACAGGACCTTGTTGGACATGCTGGTTTCCCTTGAGCCTAGCCAGAAATGCAAGTGGAGTCATCTTGCGTATGCATATAATTGTACTGTCAATGAGGCCACTGGTTTCGCACCCTATTTTCTTATGTTCAGCAAGGAGGCCCAATTACCTGTTGATATATGTTTTGGTGTTTCCCCTGACAACACATTATCTGTGTCATATTTGAATTATGTGACCAAAATGAAAAGACAAGACCCTAACAGACAGCACAGCAGCATTAGCTACATTTTATTTGATCCAGCTACAATAATTCTCTCCATGACCCAAGATGGCCGCCCAATCGTGTTCTATGTTGAGGAGTTCCTCCAGCTCTCCCACCAGGTGCCTTGGAATGACAGGACTTTAAAGACTGTCTTCTGGAGTGGTCTGGATGACCAGCCCTGAAGAAATCTTCCCTTCTGAGGTTTCCACATCCAGAATCTCAACCCGTCATGGCGGCCATTCCAGAGTCTTGTCCCATCATGGCCGCCATTCCAGAGTCTCGTCCTGTCATGGCCACCATTCCAGAGTCTCGTCCCATCATGGCCGCCATTCCAGAGTCTCGTCACTTGTGCGGCGGCCATTTTGGTTGAGATACCATCTTCCAGGCACATACCATCTTCCGGGCTCTACTGGTGGAGTATGAGGTGATGTCCTGGAGCCCAGAGATGGCTGTAGTCCCCGAATTAAGCCCAGAGATGATTCCAGTCCCTGAGTTCAACCCTGAAAGGACTCCAGTCCCCGAGTTCAGTCCTGAGATGACTCCAGTCCCTGAGTTCAGCCCAGATATGGCTCCTATCCCAGAGTTGACTCCTACTTCCAAGTACAGCCCAGTGAGGGCTCCAGCCCCTGACCAGAATCTAGTGAAGGCTCCAGCCCCTGACCAGAGTCCAATGAAGGCTCCAGCCCCTGAGTGCAGTAGAGTCCGCTCCAGCATGTTCCCCAGAGTCCGCTCCAGTATGCTCACCAGACTCCGCTCCAGTTTGCTCCCCAGGCTTCGCTCTAGTATGCTCCCTAGGCTTGGCTCTAACTTCAGCTCCAGCCCATGAGCCCACTTATACTTTAGAGCTCAGCCAGGAAACCACTCTCTCTTTCCAAAGCTCACCGCAGAATCCCTCTTGGCTTACAGAGGCCTAGCTCTGTCCAGGAAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000072_00235619_00238502.mRNA True 1617 mRNA 0.51 5 234869 238502

Neighbor

gene id symbol gene type direction distance location
CI01000072_00208491_00215135 NA coding downstream 19734 207655 ~ 215135 (-)
CI01000072_00178958_00188889 NA coding downstream 45980 178879 ~ 188889 (-)
CI01000072_00153905_00173611 NA coding downstream 60679 153335 ~ 174190 (-)
CI01000072_00099537_00100614 NA coding downstream 134251 99168 ~ 100618 (-)
CI01000072_00270378_00272531 NA coding upstream 31685 270187 ~ 272677 (-)
CI01000072_00281180_00284855 NA coding upstream 42201 280703 ~ 285182 (-)
CI01000072_00326699_00334092 SLC46A1 coding upstream 86833 325335 ~ 334595 (-)
CI01000072_00353460_00366394 SLC46A1 coding upstream 114764 353266 ~ 366583 (-)
CI01000072_00384630_00389183 UNC119B, UNC119, UNC119A coding upstream 145407 383909 ~ 389321 (-)
G283888 NA non-coding downstream 2575 231852 ~ 232294 (-)
G283881 NA non-coding downstream 10634 223420 ~ 224235 (-)
G283873 NA non-coding downstream 32495 201959 ~ 202374 (-)
G283844 NA non-coding downstream 83680 148162 ~ 151189 (-)
G283868 NA non-coding downstream 94413 140164 ~ 140456 (-)
G283845 NA non-coding upstream 2100 240602 ~ 243906 (-)
G283896 NA non-coding upstream 13339 251841 ~ 252191 (-)
G283914 NA non-coding upstream 35430 273932 ~ 274259 (-)
G283916 NA non-coding upstream 37692 276194 ~ 277837 (-)
G285534 NA other upstream 1097005 1335507 ~ 1354932 (-)
CI01000072_01596829_01610605 NA other upstream 1355609 1594111 ~ 1627895 (-)
G285766 NA other upstream 1767049 2005551 ~ 2008309 (-)
G285752 NA other upstream 1929546 2168048 ~ 2170658 (-)

Expression


Co-expression Network