CI01000072_00270378_00272531


Basic Information

Item Value
gene id CI01000072_00270378_00272531
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 270187 ~ 272677 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000072_00270378_00272531.mRNA
ACTGTGCATGCCAGTGGGGGAAAGAGACTTAAAGACCCAGGTGGCAGAGAAGCACTGGTTGATGGGCCTTCAGCTCACCCCTGAAAGAGGAAGCTGACACTTCTGAGGGCTGGCAATGAAAAGACTGAGTTAATGCAGAAACAACAATGGAAACAACCTGCCATGAGATGCAGAGAGAGAAAGACAGCTGCATTCAGAGTCAACCTCATGCTCCACCTGGTCCTCATCACAGACTGAGAGACCCAACGTACTGGATGAAGAGAGACACTAAAACCGCCAAACAGGCTCAACTGACTGATGATACGAGTGGGGGACTTCCATCTCTTCCTCGTGTGTGTGCAGGGAAGTGTCCTATGGGGGATCAACGAGGAGAACGAGCAGACTCAACTGGTGGCTTAAAAGCCCACTGTTTGCTCCAACTGATCAAGAGCATCCCAGAGCCAAGGAAGGATCGACGAACACCTCAGTGCTTAGCAACACAAGGAGAATGCGACAGAGAGACTGATTACATCATCCTGATGATGAAGCACAGAATGAAGAGATTGAGACTTTGAAGGATTGAGTTGTTTATATTTATCAAAGGATATATTTTGTTTATTTTGTCTATTTGTGTGACACATCTGATAGTTATGTTATTTTACTTAGTTCAAGTAATGGGGTCTAGTGTTGATATCGATTTCACAATTCATTTTGGCAGATTAATTTTACTATTTACATTACATTACTAAAACTGGCTAAAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000072_00270378_00272531.mRNA True 745 mRNA 0.43 2 270187 272677

Neighbor

gene id symbol gene type direction distance location
CI01000072_00235619_00238502 NA coding downstream 31685 234869 ~ 238502 (-)
CI01000072_00208491_00215135 NA coding downstream 55052 207655 ~ 215135 (-)
CI01000072_00178958_00188889 NA coding downstream 81298 178879 ~ 188889 (-)
CI01000072_00153905_00173611 NA coding downstream 95997 153335 ~ 174190 (-)
CI01000072_00099537_00100614 NA coding downstream 169569 99168 ~ 100618 (-)
CI01000072_00281180_00284855 NA coding upstream 8026 280703 ~ 285182 (-)
CI01000072_00326699_00334092 SLC46A1 coding upstream 52658 325335 ~ 334595 (-)
CI01000072_00353460_00366394 SLC46A1 coding upstream 80589 353266 ~ 366583 (-)
CI01000072_00384630_00389183 UNC119B, UNC119, UNC119A coding upstream 111232 383909 ~ 389321 (-)
CI01000072_00390666_00393574 NA coding upstream 117777 390454 ~ 393912 (-)
G283896 NA non-coding downstream 17996 251841 ~ 252191 (-)
G283845 NA non-coding downstream 26281 240602 ~ 243906 (-)
G283888 NA non-coding downstream 37893 231852 ~ 232294 (-)
G283881 NA non-coding downstream 45952 223420 ~ 224235 (-)
G283873 NA non-coding downstream 67813 201959 ~ 202374 (-)
G283914 NA non-coding upstream 1255 273932 ~ 274259 (-)
G283916 NA non-coding upstream 3517 276194 ~ 277837 (-)
G284124 NA non-coding upstream 17611 290288 ~ 297252 (-)
G284142 NA non-coding upstream 50155 322832 ~ 352560 (-)
G285534 NA other upstream 1062830 1335507 ~ 1354932 (-)
CI01000072_01596829_01610605 NA other upstream 1321434 1594111 ~ 1627895 (-)
G285766 NA other upstream 1732874 2005551 ~ 2008309 (-)
G285752 NA other upstream 1895371 2168048 ~ 2170658 (-)

Expression


Co-expression Network