G283916


Basic Information

Item Value
gene id G283916
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 276194 ~ 277837 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU321794
GGCGTGCCGAAAGGTGAATGCTACAACAGAAACTAACCCTTAACCCTATCCCTAACCTTAACAGACAGCTTTCACTACCAATTATAAAGACCTTTCTCCAACTTTTAACATGTCCCAACCTTTCTCCACACCCAATGCTCCAACATGGCATGACCCACACCTGCAAAAACACACTAAAGCAGGTTTTGTCATCAAAGCATGCAATCTGAAATTTGAAATCCAATTCATAATTTAGGATTCTTATCATCTTAACCAAAACTGACCCATAAATGCGACCCAAACAAAGCCTAACAGACTGAAGAGCAACTTCAACAACTGCTGTTAACATATTCAAAAGCAATGGAAAAACACATCTGAACTGTACATGCTATATAGTTAGATTATAAGTCATATTCATATTACACTGTAGAAGCCAACACTGTAGTAATGTACAGAACATTTTATATTAATATATGAATTCACAGTTCTTCACCTTATTTATTGTTTGTGTACTGATGTGTAATATTTTACACTGCCTGTACTCATACTATAGTCAGAAAGCAAATAAGAATTCCATTCCAGATGTTTATTTTTTTGCAATAAAGTACCCTTCACATTAGCATACATTCAATGTGAAGTTATTAACATTACAACAGAGCTAAATATTTTGGGATACTGATCCATTCATAGTTTGAACAAAAACATACATTATTTACTTAATTTAATACATTTAATAAATTATTTAAATTAATTTACTGTACATGAAAAGGTCACGGTATTATGGAACACAACATTGACATTTCTGAGAAGTGTCTTAGATACAAATTCCACTGGAAATACATCCAGAGACGCATGGACATTCTGTACAAATGTAATTTGGTTAGAAATGTATTAATTACCTAATAACTAGAACAGAGAATGTTTAAAGTTAAAAAGCAAAACAATTTTTAAACATCTAAAAATCTAAACAGCACTGAAACAACAAATATAAACATCAATATTTTGAGAACTTTCCAAATGGATGACAATGTGTAATAGACTAGCTATGCAAAGAGCTAAAACACTGGTCTGAAACTCAGTTCCTAGAGGGCCACAGCTCTGAACAGTTTTGCTCCAACCCTAATCAAACACACCTGATCCAGCTAATCAAGGGGCACATTCAAGCTTAAACCGGTGCGCAAAGTTTTGCTACGGTTTCCGGGTTGAACACCATATTAAACAAAATAGACATGTTTCCTGGAAATGGTGTGCAACGAGGTTTGAGATACGTTTTCTCTTGTTTGGTGGGTGTGTCAAAATGCCCAATCAGCATCAACATGTATATAAACCACGCGGTATTATAGAGACAGCTCACACAATGGGTCCAAGTAAAGTCGTTTACAAATGTGTCCGCTGGAGCTCGGTATATGCAACAACTGAAGATATTAGAAGACATGTTTGTCATAAGAGTTTTATAGTAAAAATATAGCATATCTATTCTTCAAAAAGAACACAAAGAATGGCCTTCTCAGCTGCCATAGTTGCAACTCTTGCGTCATCAGAACAGGGTGTTCAGCGTACCACCGTTTCCATTTAAAAAACGTTTTGCAACGTTTTGTCGGGGCTGAACGCAGCCCAGGTCTTCAGCGTTACTACCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU321794 True 1617 lncRNA 0.36 2 276194 277837

Neighbor

gene id symbol gene type direction distance location
CI01000072_00270378_00272531 NA coding downstream 3517 270187 ~ 272677 (-)
CI01000072_00235619_00238502 NA coding downstream 37692 234869 ~ 238502 (-)
CI01000072_00208491_00215135 NA coding downstream 61059 207655 ~ 215135 (-)
CI01000072_00178958_00188889 NA coding downstream 87305 178879 ~ 188889 (-)
CI01000072_00153905_00173611 NA coding downstream 102004 153335 ~ 174190 (-)
CI01000072_00281180_00284855 NA coding upstream 2866 280703 ~ 285182 (-)
CI01000072_00326699_00334092 SLC46A1 coding upstream 47498 325335 ~ 334595 (-)
CI01000072_00353460_00366394 SLC46A1 coding upstream 75429 353266 ~ 366583 (-)
CI01000072_00384630_00389183 UNC119B, UNC119, UNC119A coding upstream 106072 383909 ~ 389321 (-)
CI01000072_00390666_00393574 NA coding upstream 112617 390454 ~ 393912 (-)
G283914 NA non-coding downstream 1935 273932 ~ 274259 (-)
G283896 NA non-coding downstream 24003 251841 ~ 252191 (-)
G283845 NA non-coding downstream 32288 240602 ~ 243906 (-)
G283888 NA non-coding downstream 43900 231852 ~ 232294 (-)
G283881 NA non-coding downstream 51959 223420 ~ 224235 (-)
G284124 NA non-coding upstream 12451 290288 ~ 297252 (-)
G284142 NA non-coding upstream 44995 322832 ~ 352560 (-)
G284162 NA non-coding upstream 130595 408432 ~ 408826 (-)
G284169 NA non-coding upstream 147321 425158 ~ 425367 (-)
G285534 NA other upstream 1057670 1335507 ~ 1354932 (-)
CI01000072_01596829_01610605 NA other upstream 1316274 1594111 ~ 1627895 (-)
G285766 NA other upstream 1727714 2005551 ~ 2008309 (-)
G285752 NA other upstream 1890211 2168048 ~ 2170658 (-)

Expression


Co-expression Network