G284142


Basic Information

Item Value
gene id G284142
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 322832 ~ 352560 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU322072
TTACAATAATAATGAACGTAAACTTACAGAGCTCTAGTTGTACCACCTGACTGCTACAGATTCATTTCAGCATTGATAGTGTTGACACAGAAACGCATAATGACGTGTGAAGTCTGCGCGAGCAGGAGCACAGAGGTATGGAAATACATATGCTGACAGGCAGGAAGCACATTGTATCATTGCATGCAATGATTGGACGAACATTTTTTGATCCTAAGACTTCCACAAAAGATATATGTACATGATTTAATATTTAGACCACTATTATTATTTGCTGTCAGGATGTGAAGAGAGTTTCAACCAGTATAACAAAATGTGTTCATAGAAAAATTGCCTACCCTACCTTTAACATAACTTAAACTGCACAAACCTGTAAAAACAGAAACTATTTTTATGGAGCTACAGTATTTTTCACGCCTGAGTAACCTACTGCAAACCATTTATAAAAAAAAAATGAAAAAATTAGTGTTTCATAAGGCTTTTTTTCAATAGTTCCAACTGATAATGCTATAATGCTAGATTATCTAGTATTATCTATCATATAAACAGAGAATGACTATGCTTTATGTCACAAATACGATTGATAATGCAGAAATCGATTTAACTTCCTGAGTTACAGAAATGTCCCACACAATTCTGGGAACATGGTCAGCACATAGTATGATTACTATACTGCAATTGAGGAATATTCAGTGTTATTTAGTGCCAAAAATGCTGTCTACAGATATAAGCTGTTAATAACTTAGAATCTTTAAGGTGCATCACATTTATTGTTGTTTGGGGAACTCCAGTCATTACAACAGGAATCCACGCAATTGCAAATTTTGTGTGAGGGCGAAAGATTTCCCTTTGCAGATTTGACAACGGGTTTCAAGTCAGCAGAATGCTGCTTTGTTTGAAAGTGACTCCGTCTGAGCTGTGTATCATACATCGCCATTGAAAGGTGACAGACCTATTTTGGTCTGTCCCTAATTTCCCTAATGCAACCGCACCTTTAAAGGGTTAGTTCATCCAAAAATGAAAATTCTGTCATTAATTACTCACCCTCGTGTCGTTCCAAACCCACAATCATGTTTCTTCTGAAAATTTTGGACTAAACCACTTCGTTTTACATAGTTGTCAATGGAGGTACAGAAATCATTCAGATTTCTTTAAAAAGATCTTCATTTGTGTTCCGAAGATGAACGAAAGTCTTGTGGGTGTGGAACGACATGAGGGTGAGTAATTAATGACAGAATTTTCATTTTTGGGTGAACTAACCCTTTAAAGTTCTACTGCATCTCTGAGTAAGTTACATTTATATCTTTTTCTCCCAAGAAAATTCAACAGTAATCTATCTAGACCAGCTACATGCATACAACCAAAGGAAACACTGGCCTCTGAGGGGTAACAGGTGTGTTCTGGTTACATGATGGCAATTACTTAATGCAACATTATTCCTTTTCTGGCTCTTTTTTGTCTGTTTTTGCAGCATCTGGTTGTTCTTGGCTGGGGCATGCCTTGAGGAAGCGCAGAATCTTGTTGATAGTGGCTTCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU322072 True 1539 lncRNA 0.37 2 322832 352560

Neighbor

gene id symbol gene type direction distance location
CI01000072_00281180_00284855 NA coding downstream 37650 280703 ~ 285182 (-)
CI01000072_00270378_00272531 NA coding downstream 50155 270187 ~ 272677 (-)
CI01000072_00235619_00238502 NA coding downstream 84330 234869 ~ 238502 (-)
CI01000072_00208491_00215135 NA coding downstream 107697 207655 ~ 215135 (-)
CI01000072_00178958_00188889 NA coding downstream 133943 178879 ~ 188889 (-)
CI01000072_00353460_00366394 SLC46A1 coding upstream 706 353266 ~ 366583 (-)
CI01000072_00384630_00389183 UNC119B, UNC119, UNC119A coding upstream 31349 383909 ~ 389321 (-)
CI01000072_00390666_00393574 NA coding upstream 37894 390454 ~ 393912 (-)
CI01000072_00395219_00398674 CRYBB1L3 coding upstream 42636 395196 ~ 398744 (-)
CI01000072_00672699_00753165 NA coding upstream 319666 672226 ~ 753271 (-)
G284124 NA non-coding downstream 25580 290288 ~ 297252 (-)
G283916 NA non-coding downstream 44995 276194 ~ 277837 (-)
G283914 NA non-coding downstream 48573 273932 ~ 274259 (-)
G283896 NA non-coding downstream 70641 251841 ~ 252191 (-)
G284162 NA non-coding upstream 55872 408432 ~ 408826 (-)
G284169 NA non-coding upstream 72598 425158 ~ 425367 (-)
G284232 NA non-coding upstream 268355 620915 ~ 621838 (-)
G284231 NA non-coding upstream 269478 622038 ~ 631366 (-)
G284234 NA non-coding upstream 281185 633745 ~ 635345 (-)
G285534 NA other upstream 982947 1335507 ~ 1354932 (-)
CI01000072_01596829_01610605 NA other upstream 1241551 1594111 ~ 1627895 (-)
G285766 NA other upstream 1652991 2005551 ~ 2008309 (-)
G285752 NA other upstream 1815488 2168048 ~ 2170658 (-)
G286005 NA other upstream 2641209 2993769 ~ 2999495 (-)

Expression


Co-expression Network