CI01000072_00178958_00188889


Basic Information

Item Value
gene id CI01000072_00178958_00188889
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 178879 ~ 188889 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000072_00178958_00188889.mRNA
ATGAAGCTGGAGGTTACAGCAGTGGATGTAGGAGATACGCCTGCCTTACCTGAACACCTCTCGCTCCCACTCATCACTGATGCTCGTTCATCACACTGGCTCTGTATATACTCAGACAGGTGTCGTAATAATAATCTGCATCAAGCTGCTGGAACCAATGAGATGTTCCTCTGGCACATCATTGCACGCAAAGCCGGACTGTACCCCGCTCTGCCCTCGAGCTCCCCACAGCTCTGTCCACTGCATCAGCAGGTGCTGGAGCTGTACTGCTGTGATGATAAACACTGCATCTGTGAGGAGTGTAGCCTTCTGGGACACAAGGGTCATCAGGTGGTGCGGCCGGATGAAGAGCGACAGAAGATTCAGAGCTCAATGCAGAAGCTGATGATGGACAGTCAGGCCGTCTTCATGGATGTGTTGAGGAGCGTTGATCTCAGCCGCTCTCAGGCGCTCGAGCTGCTTCAGGCTCATGAGAAATCGTCCTCGAGCCACATACAGGCCCGAACCTACCAGATACAGCAGGAGATCGCCCATTTGCACCGGAGACAAGAGGAGCTGAAGACACTGGACAGCATTCAGGATCCCATCACCTTCCTGAACACATTCATGGCGGTGGACTCCATGGATCCGGCGGGAAGTGTAGCGATGGAGATATTGACTCCAGAGTCAGTGATATCAGGAGTCAGATCGTCTCTGGATGCTTTCAGAGAGGGGGCAGAAAATCTCACCAAAACCAGCCTGGCCAGTATCTTTAGAGTTGTCAATGATGCGGCTGCTCTGGCACAATCATCCAGTCAGTCATGTGACGGAGGCGTCATCTCCAGCGAATCACAGCCGCCCTCACAAACCCCAGCTTTTCAGATTACAGAAGTAAAGTCTGTCTCTGTGAAACCGGATGTTAAACCCAAAGTCAAAGCTTTGTCTCCTGCAACACAAGAACAGCACAAGAAACAGGACTGTCCCTCTGCCAATCCTATGGAGGGAACAGCATCCTGTTGTCTGTCTAAACCAGCTCCTAAAACCAGAGAGGAAATGCTTAAATTATTTAATGGTGTGTATTTTCTTTCAGTCCGCATCGAGCCTACACTAGATCACAACAGTGCTTTCCGTCAGATTCGTTTATCTGATGGATATCGCAAGGCGACTCTCTGCGCGGAGAACCAGAGTTATCCGGATCATCCGGACCGCTTCGTGTACTGGAGGCAGGTGATGTGTGTGGAGCCGCTGGCCGGGAGCCCGTACTACTGGGAGGTGGAGTGGACGGGACAGAGGGTAACAGACTACTCCAACATTATAATTCACAAAAGCCTTATGTTCAAGGTGACTGTTGGCGTGGCGTATAAAGACATGGAGCGCTCTGCAGCCGAGGACAGCGCCAGACTGGGCCACAACACACGATCCTGGAGCCTGTACTGGTCCGGCAAGGCTTTCTCTATGTGGCATGCTGGGAAAGAAACCGCACTGGCTGGTCCCAAAGCCAAGCGTATCGGGGTTTACCTGGACCAGCAGGCCGGCGTACTGGCTTTCTATCGAGTCTCGCACAATCAGGCCCAGGAGATATGTTGCGTTCACACGGATTTCGACGCTCCTCTCTTCGCCAGTTTCCGCTTCTGGTCTGGAGTCGGCTCCTCCATCACTATCTGTGAGCTCAACTGAAGAGAAAAGAAGTACAGAAGCATATGCCTTTATAGCTTTCTGTATCTGTTTTTCATCACAACTTGACTGTCAAAATAAA

Function

NR:

description
Si:dkey-252h13.6 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000072_00178958_00188889.mRNA True 1735 mRNA 0.52 9 178879 188889

Neighbor

gene id symbol gene type direction distance location
CI01000072_00153905_00173611 NA coding downstream 4689 153335 ~ 174190 (-)
CI01000072_00099537_00100614 NA coding downstream 78261 99168 ~ 100618 (-)
CI01000072_00208491_00215135 NA coding upstream 18766 207655 ~ 215135 (-)
CI01000072_00235619_00238502 NA coding upstream 45980 234869 ~ 238502 (-)
CI01000072_00270378_00272531 NA coding upstream 81298 270187 ~ 272677 (-)
CI01000072_00281180_00284855 NA coding upstream 91814 280703 ~ 285182 (-)
CI01000072_00326699_00334092 SLC46A1 coding upstream 136446 325335 ~ 334595 (-)
G283844 NA non-coding downstream 27690 148162 ~ 151189 (-)
G283868 NA non-coding downstream 38423 140164 ~ 140456 (-)
G283866 NA non-coding downstream 46598 132053 ~ 132281 (-)
G283873 NA non-coding upstream 13070 201959 ~ 202374 (-)
G283881 NA non-coding upstream 34531 223420 ~ 224235 (-)
G283888 NA non-coding upstream 42963 231852 ~ 232294 (-)
G283845 NA non-coding upstream 51713 240602 ~ 243906 (-)
G283896 NA non-coding upstream 62952 251841 ~ 252191 (-)
G285534 NA other upstream 1146618 1335507 ~ 1354932 (-)
CI01000072_01596829_01610605 NA other upstream 1405222 1594111 ~ 1627895 (-)
G285766 NA other upstream 1816662 2005551 ~ 2008309 (-)
G285752 NA other upstream 1979159 2168048 ~ 2170658 (-)

Expression


Co-expression Network