G283881



Basic Information


Item Value
gene id G283881
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 223420 ~ 224235 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU321752
GTCACTTTCAAAGTGCTTTGAAATCGCCCTCATATTTTTACCCGATTTGCTTCAAACTTCGTCAGAATAATGCCAAGACACTGCAGATGTACACCTGTGAAAGAATTCTTGATATCTTGAATACTGTTGTCATGGAAACGCATCAAACTTTAATATTCTTTTTGGGTGTTTTTGAGACTCTTAGCATGCTTCAAATTGCATGAAACGCGACACACACATTAGAGTTGTCGGCCAGTAGACATGGGCAATGCAGATTGGGCATGTAGGAGGGGTTCTATAGCGCAGTCTTTTGACAAAAGTGGGGGGTTAATTTTACCTACAGTCACCAAACTCTGAGCGTATATTGTTCTCATCGAGCCGAACAACTTTCTAATCACAAAAGTCAAAATATTTAATCCAGTTCTATCTAGTTGAAGATCATATTCATTGCACCGGTATGGGATGGTTTGTTGGGAATCTGTGCCACTGGCTTTCGTGTCGGTGAGACCTTCACAGGGGATGATCTAGTTGACACAATCTCTGCTGACACTTCAGGGCTGCGTTGTTGTCGTCGTGTCTGGGTGCAGGTCCTCAATCTCACCTGGATACAGCCTGGATCCGGCTGACTAGGGTAAACCTCGGGATAAACAGAGAGACTAATATTAGCGTAGATGCCATTCTTCTTCTGATGTAACGAGTACATATGGTGTTATAGGAAGTGTTCCCAGTTCCGGCTGACCTAATTTATGCAGCCTAACAATTCTTTTAATGGATGTGAAAACAAATTGATAATGTGTTATGTGTATGTCAGGTTAAAGAGATATGTTTTTAGTCTAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU321752 True 816 lncRNA 0.42 1 223420 224235

Neighbor


gene id symbol gene type direction distance location
CI01000072_00208491_00215135 NA coding downstream 8285 207655 ~ 215135 (-)
CI01000072_00178958_00188889 NA coding downstream 34531 178879 ~ 188889 (-)
CI01000072_00153905_00173611 NA coding downstream 49230 153335 ~ 174190 (-)
CI01000072_00099537_00100614 NA coding downstream 122802 99168 ~ 100618 (-)
CI01000072_00235619_00238502 NA coding upstream 10634 234869 ~ 238502 (-)
CI01000072_00270378_00272531 NA coding upstream 45952 270187 ~ 272677 (-)
CI01000072_00281180_00284855 NA coding upstream 56468 280703 ~ 285182 (-)
CI01000072_00326699_00334092 SLC46A1 coding upstream 101100 325335 ~ 334595 (-)
CI01000072_00353460_00366394 SLC46A1 coding upstream 129031 353266 ~ 366583 (-)
G283873 NA non-coding downstream 21046 201959 ~ 202374 (-)
G283844 NA non-coding downstream 72231 148162 ~ 151189 (-)
G283868 NA non-coding downstream 82964 140164 ~ 140456 (-)
G283866 NA non-coding downstream 91139 132053 ~ 132281 (-)
G283888 NA non-coding upstream 7617 231852 ~ 232294 (-)
G283845 NA non-coding upstream 16367 240602 ~ 243906 (-)
G283896 NA non-coding upstream 27606 251841 ~ 252191 (-)
G283914 NA non-coding upstream 49697 273932 ~ 274259 (-)
G283916 NA non-coding upstream 51959 276194 ~ 277837 (-)
G285534 NA other upstream 1111272 1335507 ~ 1354932 (-)
CI01000072_01596829_01610605 NA other upstream 1369876 1594111 ~ 1627895 (-)
G285766 NA other upstream 1781316 2005551 ~ 2008309 (-)
G285752 NA other upstream 1943813 2168048 ~ 2170658 (-)

Expression



Co-expression Network