CI01000075_00537393_00544463 (NDUFV2)


Basic Information

Item Value
gene id CI01000075_00537393_00544463
gene name NDUFV2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 537334 ~ 544463 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000075_00537393_00544463.mRNA
CACAGAGACACACCGGACAACAATCCAGAGACTCCATTCGAGTTCTCCCCAGAAAACCTGAAGAGAGTTGAGGCCATCATTAATAATTACCCAGAGGGACACAAGGCGGCCGCCACCATTCCTGTGCTGGATTTGGCTCAGAGGCAACATGGATGGCTTCCTATTTCAGCAATGAACAAGGTGGCAGAGATCCTGGGCATTGCTCCAATGAGGGTTTATGAAGTAGCAACTTTCTACACCATGTTTCTCCGTCAGCCAGTGGGAAAGTACCACATCCAGATCTGCACCACTACGCCCTGCATGCTCTGTGACTCGGACAGCATCCTGGAGGCCATCCAGAACAAACTGGGTATCAAAGTCGGGGAGACTACAGCAGATAAATTATTCACGCTAACAGAAGTCGAATGTCTCGGAGCTTGTGTGAACGCACCAATGGTCCAGATCAACGATAACTATTATGAGGATCTTAAACCATCAGACATGGAGCAGATCCTTGATGAGCTGAAGGCAGGGAGAGTTCCTCCTCCTGGGCCCAGGGGTGGGCGTTTTTCATGTGAACCCGCTGGAGGTTTAACCTCCCTGACAGAACCTCCTCCTGGACCGGGCTTTGGTGTGAGACCTGACCTGTAACTGGACCTCCATGGTCTTGAGCCCTTGTAAACGTCAGAGATGTTGTGTATGTAAATAAA

Function

symbol description
ndufv2 Predicted to enable 2 iron, 2 sulfur cluster binding activity; metal ion binding activity; and oxidoreductase activity. Predicted to be involved in mitochondrial electron transport, NADH to ubiquinone. Predicted to be part of mitochondrial respiratory chain complex I. Is expressed in several structures, including alar plate midbrain region; digestive system; optic tectum; optic vesicle; and retina. Human ortholog(s) of this gene implicated in Parkinson's disease and nuclear type mitochondrial complex I deficiency 7. Orthologous to human NDUFV2 (NADH:ubiquinone oxidoreductase core subunit V2).

GO:

id name namespace
GO:0045272 plasma membrane respiratory chain complex I cellular_component

KEGG:

id description
K03943 NDUFV2; NADH dehydrogenase (ubiquinone) flavoprotein 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000075_00537393_00544463.mRNA True 689 mRNA 0.50 6 537334 544463

Neighbor

gene id symbol gene type direction distance location
CI01000075_00490048_00493037 NA coding downstream 43957 490048 ~ 493377 (-)
CI01000075_00459964_00473668 TWS1A, TWSG1A, TWSG1 coding downstream 62398 459723 ~ 474936 (-)
CI01000075_00448756_00452145 RNF126 coding downstream 85189 447768 ~ 452145 (-)
CI01000075_00385897_00442260 HCN2 coding downstream 95074 384154 ~ 442260 (-)
CI01000075_00336241_00341860 SPINC, SPINB coding downstream 195474 336241 ~ 341860 (-)
CI01000075_00582299_00626751 MTCL1 coding upstream 37597 582060 ~ 627854 (-)
CI01000075_00636212_00641437 MTCL1 coding upstream 91521 635984 ~ 641437 (-)
CI01000075_00649702_00654404 NA coding upstream 104957 646532 ~ 654604 (-)
CI01000075_00686719_00747700 PIEZO2 coding upstream 140668 685131 ~ 747700 (-)
CI01000075_00749894_00757773 NA coding upstream 205379 749842 ~ 758555 (-)
G289099 NA non-coding downstream 135393 399845 ~ 401941 (-)
CI01000075_00307523_00328194 NA non-coding downstream 211966 307523 ~ 331562 (-)
G289076 NA non-coding downstream 264204 271394 ~ 273130 (-)
G289060 NA non-coding downstream 281006 252885 ~ 256328 (-)
G289090 NA non-coding upstream 3890 548353 ~ 566986 (-)
G289101 NA non-coding upstream 111396 655859 ~ 660945 (-)
G289148 NA non-coding upstream 120483 664946 ~ 665273 (-)
G289155 NA non-coding upstream 130826 675289 ~ 677231 (-)
CI01000075_00275752_00278496 NA other downstream 258794 275238 ~ 278542 (-)
G289036 NA other downstream 422729 108703 ~ 114605 (-)
CI01000075_00022145_00044289 NA other downstream 481570 20947 ~ 44289 (-)
G289167 NA other upstream 225631 770094 ~ 788399 (-)
G289427 NA other upstream 947860 1492323 ~ 1515938 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015962 ndufv2 coding NC_007113.7 CM002886.2 54641644 ~ 54690184 (+)