Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_011045 |
| gene name | NA |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 46796412 ~ 46798742 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0009581 | detection of external stimulus | biological_process |
| GO:0009582 | detection of abiotic stimulus | biological_process |
| GO:0009583 | detection of light stimulus | biological_process |
| GO:0009314 | response to radiation | biological_process |
| GO:0050953 | sensory perception of light stimulus | biological_process |
| GO:0009628 | response to abiotic stimulus | biological_process |
| GO:0104004 | cellular response to environmental stimulus | biological_process |
| GO:0007600 | sensory perception | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0007602 | phototransduction | biological_process |
| GO:0009416 | response to light stimulus | biological_process |
| GO:0051606 | detection of stimulus | biological_process |
| GO:0071214 | cellular response to abiotic stimulus | biological_process |
| GO:0018298 | protein-chromophore linkage | biological_process |
| GO:0071478 | cellular response to radiation | biological_process |
| GO:0071482 | cellular response to light stimulus | biological_process |
| GO:0097272 | ammonium homeostasis | biological_process |
| GO:0042995 | cell projection | cellular_component |
| GO:0001750 | photoreceptor outer segment | cellular_component |
| GO:0043005 | neuron projection | cellular_component |
| GO:0120025 | plasma membrane bounded cell projection | cellular_component |
| GO:0097458 | obsolete neuron part | cellular_component |
| GO:0097730 | non-motile cilium | cellular_component |
| GO:0097731 | 9+0 non-motile cilium | cellular_component |
| GO:0097733 | photoreceptor cell cilium | cellular_component |
| GO:0009881 | photoreceptor activity | molecular_function |
| GO:0008020 | G protein-coupled photoreceptor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00021836 | True | 1103 | lncRNA | 0.38 | 4 | 46796412 | 46798742 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_011044 | FO082781.1 | coding | downstream | 30259 | 46760625 ~ 46766153 (-) |
| XLOC_011043 | tmem176l.4 | coding | downstream | 131947 | 46649469 ~ 46664465 (-) |
| XLOC_011042 | tmem176l.2 | coding | downstream | 151016 | 46639772 ~ 46645396 (-) |
| XLOC_011041 | NA | coding | downstream | 173969 | 46621203 ~ 46622443 (-) |
| XLOC_011040 | tmem176l.3a | coding | downstream | 176445 | 46596206 ~ 46619967 (-) |
| XLOC_011046 | NA | coding | upstream | 7495 | 46806237 ~ 46810212 (-) |
| XLOC_011047 | LO017877.2 | coding | upstream | 399370 | 47198112 ~ 47245563 (-) |
| XLOC_011048 | mios | coding | upstream | 474083 | 47272825 ~ 47301376 (-) |
| XLOC_011049 | NA | coding | upstream | 503704 | 47302446 ~ 47304669 (-) |
| XLOC_011050 | LO017849.1 | coding | upstream | 550024 | 47348766 ~ 47381652 (-) |
| XLOC_010626 | CR392024.2 | misc | downstream | 25901237 | 20895112 ~ 20895175 (-) |
| XLOC_011033 | NA | non-coding | downstream | 336562 | 46396002 ~ 46459850 (-) |
| XLOC_011032 | NA | non-coding | downstream | 403127 | 46350228 ~ 46393285 (-) |
| XLOC_011031 | CU469499.1 | non-coding | downstream | 455755 | 46340543 ~ 46340657 (-) |
| XLOC_011030 | BX537142.1 | non-coding | downstream | 579503 | 46216808 ~ 46216909 (-) |
| XLOC_011054 | CR388140.2 | non-coding | upstream | 1144401 | 47943143 ~ 47943257 (-) |
| XLOC_011055 | NA | non-coding | upstream | 1244642 | 48043384 ~ 48056492 (-) |
| XLOC_011056 | NA | non-coding | upstream | 1420624 | 48219366 ~ 48220310 (-) |
