XLOC_011041


Basic Information

Item Value
gene id XLOC_011041
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 46621203 ~ 46622443 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022265
CAGCAGCAGATTATAGGAAGACGTTGTACGATCAGACAGTGAAGGGTCAACCTTTGATGGAGAACTATATTGTGCAGTTGCGTGAAAGTGGAGTTCGGGGTCgaaataaaattcaaaaccaCTGGTCGACCACATTGTATAAGATAGTGAGGGCCCCGCGGGATGGGGGGCAGGTGTACAGCATTTCTCCTTTAGAAGAGCCTTCCCGGATTAAACATGTACATAGGTCCTTATTAAAGTTGGCACCTACCACTGTACAACCGACTAACCACATTGATTTAGGGTTACTAGATCAGGATTCTGGACAATGCGAGTGTGCTGACGATTCTGTAGCGGTTGTAGTTAAAACTCTGGGACCTACTTCTTCGGAAGATGATTTGTTGCTAATAGGCCAAGATAAAACATCTAGTGAGGTTTCCTCCTTGGCCCCAGTACATAACGTACCAGTTGGGGGGCCCTCTGTTGAAGGGATGGGGAGTTTACGGAGATCAAATAGAGTGACTGCAGGGAAGCATTCTAATCGTTATCATTTGCCCAAAGCAGTGACTGGTAATGTATCGGCTAGTTTATTGGTACAGGCTGGGAAGCCCTCGGAGCAAGAGTATGGTAGGACTTTTCGCCCGTGGTTATAGCTAAATCATTGGGACAATGATTGAAAAGCTGGGGGTAGATTGTGGTAGGCGGACCCTTTAGGTGCGTGCGTTGCGTGCCAATCACGTCAAGGCTTTATATGAGCAGGTGCGCGCTCCGTCTCGGGTTGGCATTTTGTTGTTTGGACCGGTTGATGGGAGTCTCTCCACTAGCCCTCCAGTGAGTAGAGCATGTTAGAAACCGTGAGTAAGATGGAATGGATTATTAAGTTTACAtgagtgtatttttcttttaaggATAGTGGTGGCAGTCTGAAATTAACCTGATTATGTGCGGCCAATTTATGGGCGTAATGTAGAGTTTATTCCAAAGAGTCTGCTAGCTGCTGCTTTGCTGTAATTTAAGTGGCATCTGGCCCTATTCTGAACTGCATTCCTACGCGTGCGTGTGTGGACATCAGACGCAAGCGCTTCGGACTCCATCCTCCTTGGCCAATTCATGTGCGCTGCCTCATTCATGCGCGCTCGCTGTATGATTTATACAGGTCCTCAAACCATCTACGAGTGTTGCCGTCGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022265 True 1167 lncRNA 0.47 2 46621203 46622443

Neighbor

gene id symbol gene type direction distance location
XLOC_011040 tmem176l.3a coding downstream 1236 46596206 ~ 46619967 (-)
XLOC_011039 BX323793.1 coding downstream 33265 46583604 ~ 46587938 (-)
XLOC_011038 si:dkey-152b24.6 coding downstream 41222 46576702 ~ 46579981 (-)
XLOC_011037 zgc:174938 coding downstream 47992 46567408 ~ 46573211 (-)
XLOC_011035 si:dkey-152b24.7 coding downstream 53859 46530244 ~ 46567344 (-)
XLOC_011042 tmem176l.2 coding upstream 17329 46639772 ~ 46645396 (-)
XLOC_011043 tmem176l.4 coding upstream 27026 46649469 ~ 46664465 (-)
XLOC_011044 FO082781.1 coding upstream 138182 46760625 ~ 46766153 (-)
XLOC_011045 NA coding upstream 173969 46796412 ~ 46798742 (-)
XLOC_011046 NA coding upstream 183794 46806237 ~ 46810212 (-)
XLOC_010626 CR392024.2 misc downstream 25726028 20895112 ~ 20895175 (-)
XLOC_011033 NA non-coding downstream 161353 46396002 ~ 46459850 (-)
XLOC_011032 NA non-coding downstream 227918 46350228 ~ 46393285 (-)
XLOC_011031 CU469499.1 non-coding downstream 280546 46340543 ~ 46340657 (-)
XLOC_011030 BX537142.1 non-coding downstream 404294 46216808 ~ 46216909 (-)
XLOC_011029 NA non-coding downstream 417858 46196125 ~ 46203345 (-)
XLOC_011049 NA non-coding upstream 680003 47302446 ~ 47304669 (-)
XLOC_011054 CR388140.2 non-coding upstream 1320700 47943143 ~ 47943257 (-)
XLOC_011055 NA non-coding upstream 1420941 48043384 ~ 48056492 (-)

Expression


Co-expression Network