XLOC_011054 (CR388140.2)


Basic Information

Item Value
gene id XLOC_011054
gene name CR388140.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 47943143 ~ 47943257 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021580
ttCCATAGCCATTTCACCCTACAGCCCAACCGAttgctcactgaagctaagcagggctgagcctggtcattacctggatgggaggccacatggaaaaactaggctactgttgaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000110920

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021580 True 115 rRNA 0.50 1 47943143 47943257

Neighbor

gene id symbol gene type direction distance location
XLOC_011052 cthrc1b coding downstream 460001 47454586 ~ 47483142 (-)
XLOC_011051 sept7b coding downstream 516127 47389539 ~ 47427016 (-)
XLOC_011050 LO017849.1 coding downstream 561491 47348766 ~ 47381652 (-)
XLOC_011049 NA coding downstream 638474 47302446 ~ 47304669 (-)
XLOC_011048 mios coding downstream 641767 47272825 ~ 47301376 (-)
XLOC_011055 NA coding upstream 100127 48043384 ~ 48056492 (-)
XLOC_011056 NA coding upstream 276109 48219366 ~ 48220310 (-)
XLOC_011057 eif3ha coding upstream 339064 48282321 ~ 48400639 (-)
XLOC_011058 rad21a coding upstream 465809 48409066 ~ 48430272 (-)
XLOC_011059 notchl coding upstream 701960 48645217 ~ 48673938 (-)
XLOC_010626 CR392024.2 misc downstream 27047968 20895112 ~ 20895175 (-)
XLOC_011046 NA non-coding downstream 1132931 46806237 ~ 46810212 (-)
XLOC_011045 NA non-coding downstream 1144401 46796412 ~ 46798742 (-)
XLOC_011041 NA non-coding downstream 1320700 46621203 ~ 46622443 (-)
XLOC_011033 NA non-coding downstream 1483293 46396002 ~ 46459850 (-)
XLOC_011061 NA non-coding upstream 877093 48820350 ~ 48821345 (-)
XLOC_011062 NA non-coding upstream 1212603 49155860 ~ 49184484 (-)
XLOC_011063 NA non-coding upstream 1272221 49215478 ~ 49222093 (-)

Expression


Co-expression Network