XLOC_011035 (si:dkey-152b24.7)


Basic Information

Item Value
gene id XLOC_011035
gene name si:dkey-152b24.7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 46530244 ~ 46567344 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021542
CTGGACTCGAAGAACGAGCATAATAAACGAGCATTAAGGTCAAGGGAAAACAGCAGGTGGCAAAAAAAACGCAGTTATCAGGTGTGGCCGCTGACGTGAAACAACGAGTTAAAAGGTTTGTTCCTGATTTACAAGCCATCTTAAACCCAGAAGAAGAAGCGGAAGAAGAAGGCTCTTAACTGCTTTGTGAACTGCTATAAAGTCTTAAAAGAAGAAGACAGTGAAGATGAGAGTTCCTGTAAAAGTTCTCTGTGTCTTCATGCTTCTGCTGCACAAGAGCTTTCAACAACAAGCGTTTAATGATAAAGCAACACTCAATCTTCCTCCTAGTTATAGAGTCGGCTGGATGGAAACTCTGGATGATGAAAAGTTGATTTCTGAAGTCAATATTCCTGGCACTCATGAAACCATGGCTCTTCTTAAAATACCAGGATCACAATGTCAGTCGTGGTCACTGGAGAACCAGCTAAAGGCTGGCATACGCTACATAGACTTGAGAGTGAAGGGAAAGAACCTGAAAATTGTGCATGGTTGGATTCCCCAGTTAACAACATTTGCTGAAGTTTTCGACACAACAAAGAGATTTTTGTCTCAGTATGAAACTGAGACGGTGTTGATCAGAGTCAAGCATGTTAAGTCAAGGGGCAGATTTCCAGAAAATGTTATACATCAGCTTAAAAATGATCCTGGCTGTTGGGTTAGTGAGAGAATTCCACAAATTAGAGAGGTAAGAGGAAAGATTGTTTTTGTTCAGAAAAACAGCTTTAAACTGGGAATCCCTCTGCTTGAAACTGATCAAAAGGGTGACTATAAagtatttagaataaaaaaaaaggaagataAAATTACTGAGCATCTGAAACAGGCTTTAGGTGCACTTAAAACTAATAGGGCTGTGCTGAGCTATTCCAGCGGCACAGGCTTGCCTCTGTTGATCATATGGAACACTCCAAACCATGTGGCAAAAGAAATCAACCCTTGGCTGTATGGTCATCTCAGTggcatttctaaacaaaatccgAAGGGTTGTTTTGGGATTATAGCGATGGACTTTCCAGGATTTGAT
>TCONS_00021545
ATTTTAATGCTTCAAATTAGGCTTCTAATTGATGTCAAGTtaagttttaaattaatattgttgcaTATCAGTTGATTTCAGTTGATTCAAATAACActcatttaatacaaaaaaaaataaaaaatatgggtACACCTTCATTAATTATGATATGGCTCTTTAAAATGAGTAAAAGAATCTATAAAAGATTGTTTGCAATGAACGATGACTGGACTCGAAGAACGAGCATAATAAACGAGCATTAAGGTCAAGGGAAAACAGCAGGTGGCAAAAAAAACGCAGTTATCAGGTGTGGCCGCTGACGTGAAACAACGAGTTAAAAGGTTTGTTCCTGATTTACAAGCCATCTTAAACCCAGAAGAAGAAGCGGAAGAAGAAGGCTCTTAACTGCTTTGTGAACTGCTATAAAGTCTTAAAAGAAGAAGACAGTGAAGATGAGAGTTCCTGTAAAAGTTCTCTGTGTCTTCATGCTTCTGCTGCACAAGAGCTTTCAACAAGAAGTGTTCAATGATGAGGCGACACTTAATCTCCCTGCAAATTATAAAATCGGCTGGATGAAGACTCTGGATGATAGTAAGTTGATTTCTCACATCACAATTCCTGGGACTCATGACACCATGGCTCTTCATGGAGGACCAGCAGCAGAATGTCAGTCGTGGTCACTGGAGGACCAACTAAAGGCTGGCATACGCTACCTGGACTTACGAGTGAACGGGAATGATCTGAAACTTGTGCATGGTGTGATTTCACAACATACAACATTCTCTGATGCCATCGACACAATTAAGAGTTTTCTGTCTCAGCATAAAACTGAGGCAGTGTTGGTCAGAGTCAAGCACCAGTCAAACGGCCCATTTCCAGCAAATGTTCTAAATGAACTTAAAAATGATCCTGATTGTTGGGTTAGTGATAAAATACCACGAATTAGAGAAGTGAGAGGAAAGATTGTTTTTGTTCAGAAAAACAACTTTAAACTGGGAATTGTTTTGTTAGAAACTGATGAAAAAGATGATTATAAAGTAAGCCATGTCAAAATTAAGGAAGCTGAAATTACTGATCATCTGAATGAGGCTTTAAAAGACTGTAAAGCTGATATTGCTGTGCTGAGCTATTCCAGCGGCACAGGCTGGCCTCTGCTGAGACTAGAGAACACGCCTAAAAGAGTGGCAAAAGAAATCAACCCTTGGTTATATAATCATCTCCAAGACCTTTCCGAACAGAATCCAAAGGTTTGTTTTGGGATCTTAGCGATGGACTTTCCTGGCTTTGATTTGATCCAACTTCTCATTAGCTTTGATTAG

Function

symbol description
si:dkey-152b24.7 Predicted to enable phosphoric diester hydrolase activity. Predicted to act upstream of or within lipid metabolic process.

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0008081 phosphoric diester hydrolase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-100921-77 Predicted to enable phosphoric diester hydrolase activity. Predicted to act upstream of or within lipid metabolic process.

Ensembl:

ensembl_id ENSDARG00000099715

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021542 False 1066 mRNA 0.41 3 46530244 46567136
TCONS_00021545 True 1301 mRNA 0.38 3 46562684 46567344

Neighbor

gene id symbol gene type direction distance location
XLOC_011034 tmem176l.1 coding downstream 5089 46518114 ~ 46525155 (-)
XLOC_011033 NA coding downstream 70394 46396002 ~ 46459850 (-)
XLOC_011032 NA coding downstream 136959 46350228 ~ 46393285 (-)
XLOC_011031 CU469499.1 coding downstream 189587 46340543 ~ 46340657 (-)
XLOC_011030 BX537142.1 coding downstream 313335 46216808 ~ 46216909 (-)
XLOC_011037 zgc:174938 coding upstream 64 46567408 ~ 46573211 (-)
XLOC_011038 si:dkey-152b24.6 coding upstream 9358 46576702 ~ 46579981 (-)
XLOC_011039 BX323793.1 coding upstream 16260 46583604 ~ 46587938 (-)
XLOC_011040 tmem176l.3a coding upstream 28862 46596206 ~ 46619967 (-)
XLOC_011041 NA coding upstream 53859 46621203 ~ 46622443 (-)
XLOC_010626 CR392024.2 misc downstream 25635069 20895112 ~ 20895175 (-)
XLOC_011029 NA non-coding downstream 326899 46196125 ~ 46203345 (-)
XLOC_011045 NA non-coding upstream 229068 46796412 ~ 46798742 (-)
XLOC_011046 NA non-coding upstream 238893 46806237 ~ 46810212 (-)
XLOC_011049 NA non-coding upstream 735102 47302446 ~ 47304669 (-)
XLOC_011054 CR388140.2 non-coding upstream 1375799 47943143 ~ 47943257 (-)

Expression


Co-expression Network