G328772


Basic Information

Item Value
gene id G328772
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 1625440 ~ 1626103 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU373681
NNTTAAGAGACGAGATTGCCAGAAGAAATATCGTTTTCAGAGTGAGGAATTTTTCTGACACCTCTTCTAGTGGTTCGAAGGGAGCCTCAGCTAGCCCCTCTAATACTATAGCCAAGTCCCAGGCTGGAGTTCTTGTGCGCACTGCAGGCCTCAGCCTCAGCGTGCCACGAAGGAAGCGTATGACAAGAGGGTCTCGACCCACCGAGAAACCCCCTACAGGAGCATGATAAGCCGAGATGGCTGCTACATAAACCTTCAATGTCGAAGGAGATAATCCTTCCGAGAACTTTTTTTTGGAGGAACTGAAGCACAAGGCTAATAGATGACTGGACAGGGTCCGTATTGCGTTGACTACACCAAGTAGAAAACAACTTCCATTTGTATGCATATAGCTTCCTTGTGGAGGGAGCTCTGGAATGAAGGATGGTCTCCACAACCTCGGTTGGGAGACCAGAATCTATGAGCCTTGCCCCCTCAGAGGCCAGGCTCACAGTTTCCATAGCTCTGGGCGGGGATGGAGTATTGTGCCACCCGCTTGAGACAGGAGATCCTGCCTGAGAGGAAGCTCCATTGGAGAGCCGTCTAACAGAGACATTAGGTCTGCAAACCATATCCTGGTCGGCCAGTACGGGGCCACCAGTATTAGGCTGACCCCTTCCTGGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU373681 True 664 lncRNA 0.51 1 1625440 1626103

Neighbor

gene id symbol gene type direction distance location
CI01000112_01517833_01520418 NA coding downstream 104894 1517728 ~ 1520546 (-)
CI01000112_01486968_01488917 NA coding downstream 135939 1485371 ~ 1489501 (-)
CI01000112_01437714_01440420 NA coding downstream 184932 1437457 ~ 1440508 (-)
CI01000112_01367862_01375489 NA coding downstream 248066 1367451 ~ 1377374 (-)
CI01000112_01324078_01345821 SEPT9, SEPT9A, SEPT9B coding downstream 279619 1324078 ~ 1345821 (-)
CI01000112_01772132_01776695 PRPSAP1 coding upstream 145644 1771747 ~ 1776853 (-)
CI01000112_01953215_01962043 NA coding upstream 327055 1953158 ~ 1962751 (-)
CI01000112_01967374_01971965 NA coding upstream 340955 1967058 ~ 1971965 (-)
CI01000112_01999128_02000283 NA coding upstream 373016 1999119 ~ 2000283 (-)
CI01000112_02000588_02006313 NA coding upstream 374424 2000527 ~ 2007133 (-)
G328738 NA non-coding downstream 52851 1572366 ~ 1572589 (-)
G328737 NA non-coding downstream 65556 1559569 ~ 1559884 (-)
G328736 NA non-coding downstream 66618 1558621 ~ 1558822 (-)
G328735 NA non-coding downstream 67956 1557244 ~ 1557484 (-)
G328734 NA non-coding downstream 70076 1554743 ~ 1555364 (-)
G329610 NA non-coding upstream 51869 1677972 ~ 1680199 (-)
G329558 NA non-coding upstream 131605 1757708 ~ 1825142 (-)
G329559 NA non-coding upstream 164981 1791084 ~ 1809739 (-)
G329638 NA non-coding upstream 190158 1816261 ~ 1816636 (-)
G329560 NA non-coding upstream 244503 1870606 ~ 1878942 (-)
G328642 NA other downstream 338482 1286655 ~ 1286958 (-)
G328641 NA other downstream 338916 1286092 ~ 1286524 (-)
CI01000112_00810157_00821637 TRIM25 other downstream 756804 808545 ~ 821932 (-)
CI01000112_00792970_00793455 CQ067, CLG09H17ORF67, C9H17ORF67 other downstream 830494 792271 ~ 793455 (-)
G328332 NA other downstream 843656 780164 ~ 781784 (-)
G329587 NA other upstream 3673 1629776 ~ 1633322 (-)
G329569 NA other upstream 365563 1991666 ~ 1997859 (-)
G329672 NA other upstream 390601 2016704 ~ 2019453 (-)
CI01000112_03068505_03072256 NA other upstream 1441217 3067320 ~ 3072879 (-)

Expression


Co-expression Network