G329517


Basic Information

Item Value
gene id G329517
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 3811534 ~ 3882944 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU374554
TTGTCGTGTAGACATTTTGGCTTGTGACGTCGGAACTGGTAATAACCTTTTTTTTCAGGCTTCTGATTGGCCAACATGGCTTTACGGTTAGGGTTATATTGCCACCTGTTGGTTTGGCATGCTCTTGACAGAGCTTCATAGTGTTTTTGCGTTTTCATGTGGACGCGTTTTTTTTTTTTTTTTTTTTTTTTGACATCCATTTTGTTTTATTATGCACAGAAACTCAAACATACAGAATTTTGCTTAACCACAAAATGTATTTTTACCCTATAAAAATTATATATCTACCAAAATCACATGGCAAATAACTCAGATTTGTCTAGAATTAAACACATTGTCATTACAGATAACAGAGCACGGTGTGGAACATACAAACCTCAGCCTCTTCCAATTCATCTTCTCCACCTGTGTCAAAAGTAAAACCTCCATTAACATTAATTCCAGCTTTAATATCAAAGAGACATGTAGTCAAAATCCGGTCAGTGATTTGATTTTAGTTAACATCAGTGCTAATCAGCAGTCTAACGCGTTAAAGACATCATTCCAGACCATACAAACGGAATATGTTTCATCCAACGAATTCAGGCCTTACCGAAAAATCACTGCCTCCAGAGTCCACTGCCATTGCAAATAATCCTAAATGGGGACAAATACAAATAATCTGTGTTAATGGTATAATCATATGAAAACAAGACTAAAGCTTGATTAAATAAACGCGAATGTAATTTCACTGTAAATGCGATCGGCCTTGCTGCAAACACGTGCTCAGGGGCCAGTTGCATTAACATCGCCATTATGCAACCGACTAGTATTCCCAACTAGCAGTTAGTTTAGTTATGGGTAATCAATCTTACTTTTCAGTATCAAATTAGACCAAAAGAGAAAAAATAAAATAAAATAAAAAATGCCTCATTAAGAAGACTAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU374554 True 926 lncRNA 0.36 2 3811534 3882944

Neighbor

gene id symbol gene type direction distance location
CI01000112_03759872_03772553 AXIN2 coding upstream 38552 3759803 ~ 3772982 (+)
CI01000112_03653384_03730444 NA coding upstream 81086 3653384 ~ 3730448 (+)
CI01000112_03608324_03621681 NA coding upstream 189846 3608324 ~ 3621688 (+)
CI01000112_03571702_03574425 NA coding upstream 236834 3571380 ~ 3574700 (+)
CI01000112_03344466_03359943 CYTH3, CYTH3A coding upstream 451238 3344466 ~ 3360296 (+)
CI01000112_03896750_03921778 ERN1 coding downstream 13806 3896750 ~ 3923164 (+)
CI01000112_03932803_03933881 NA coding downstream 49859 3932803 ~ 3933912 (+)
CI01000112_03933921_03937412 NA coding downstream 50977 3933921 ~ 3937708 (+)
CI01000112_03956622_03957718 MAFGA, MAFGB, MAFG coding downstream 73678 3956622 ~ 3957867 (+)
CI01000112_03978196_03991078 PCYT2, PCY2 coding downstream 95252 3978196 ~ 3991078 (+)
G329413 NA non-coding upstream 268508 3533229 ~ 3543026 (+)
G329381 NA non-coding upstream 423083 3388250 ~ 3388451 (+)
G329380 NA non-coding upstream 424164 3387157 ~ 3387370 (+)
G329373 NA non-coding upstream 427156 3376281 ~ 3384378 (+)
G329339 NA non-coding upstream 504655 3306588 ~ 3306879 (+)
G329512 NA non-coding downstream 89172 3972116 ~ 3973883 (+)
G330383 NA non-coding downstream 221294 4104238 ~ 4104501 (+)
G330402 NA non-coding downstream 265575 4148519 ~ 4148864 (+)
G330404 NA non-coding downstream 267043 4149987 ~ 4150244 (+)
G330396 NA non-coding downstream 272455 4155399 ~ 4157165 (+)
G329194 NA other upstream 879645 2920254 ~ 2931889 (+)
G329125 NA other upstream 1193383 2617704 ~ 2618151 (+)
G328456 NA other upstream 2578416 1232022 ~ 1233118 (+)
CI01000112_05076817_05101845 NA other downstream 1201776 5076817 ~ 5101845 (+)

Expression


Co-expression Network