CI01000113_00524568_00527858


Basic Information

Item Value
gene id CI01000113_00524568_00527858
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 523876 ~ 528298 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_00524568_00527858.mRNA
ATATATAAAGACTCAGTAATGCAAGATGCTGGTTTTATGAGAAGGACTAACATGGTATAGTATGCCAACAGACTAAAGGTTTTGCGTCTGTGGTTGTTCCCCAGTGGCCCTTCCAGCCCTGCACTGAGGCAGAGATTAAAGCCAACGGCCTGTTTTTCTCAGACTCAGACTAAATCCCACCCTCTCTTCTTCCTGTGAGAACACTCTGTCTCAGACAGATCTCGCACTCTCTCCAAGGGAGAAAGTTAGGTCAAGCGAACCTGCACTTGAGAGCTGCTGTGGATTCTCCCTTGGGGAACATGTAGTACTTGTCTCTGATTATACAGCCCTCAGAAGGACCACGGAAACGGGTCCAGGAGAAAAGCCAGAGCAGCATCACCAAAAGATCAGCTTGGGGCTGTTTGCATAAAGTAATCGACGTTGGAATTGGAGGAATTTAAGGCAAATGGACACCATTTGAGCCCTGAAACATGAGAGGATGCTTTGCACAGCTCAGATACCCGTGCTTTGCCTCCCAGCCTCTCATCGCCCTCCCCGCTGCCTTAATAAAACAAACAGGTCACGTGGTCAGGTCACATTCCCATGAGTTTATCTGGCGATTAGAGATCTTGCCTGTTGAAAAGCAATTAATAAGGAGTCCCATCCTTTTAAAAATCACATATACACCTCTTTTGGTTCACTTTGTGGTGTAAATGGCATGGGAATCGGAATACAAGTTGAACCAGATTGAGAGAAGAATTTTGCTCTCTGCCCCTTTGACCTTCAGCCATGCTGGTCAGGGATCAGCAGCTTGTGATTGCGGTGGGAGACGAGTATGTAAAAAGGGAAAGGCTTTGGGGGGAGACTACAGACTCGAGCCTTTCCCTCTCAAAGGCCCCCAAGGCGTCGTTAGGACTCCCGCGAGAGGGGCACTTCTACTGTTGGGTACGGCCATTGAAGACCGCATCTGGAAAGCATTAGTCTATTATTGCCCATGCAGGGCTGAGAGAAAAGGCCTATCTCATGGGGAGAGTGTGACCCTCTCCCGTCATTATTCCACTGCAGTGAAATGGTATGAGCTGGTGGTGGTGGGAGGGAGTAGAGCACCGGGAGATGGATTTGGGGGTGTTAGAAAGCACCAACTCAGTTGTTTCTCACTTTTGCCACATCGTCAGTGTTGGATGCTAATTCCTTTTTCTTCACCTCATAAAGAAAATGATTTCAACACTGGGCCCATAGCATCTGGAAACGTGGCAGCAGACGTGGGGTCCATGCCTCAAAAATGTCATTGGGGGAGCATTACACTCATTCAAAATGGACCTAGCGGGCGTCTGGAGCAGGAAATTAGTGAAATGTATTACACATTAGATTGCCGCTCAACTCATTACTCCGCAGCTGCTAAAGAAAGTCACTCTGACAAGGCCTCCTCCACAAACCCGTGATCTTACTAGGAAAGTAACAGCAGCACCAGGCCAAGGACAAACACAATAGTGCACATTATGAAATAGCTCTCCAGAGTGATAAAAACTGAAGCTGAATTTTTGTAATATGGGGGTGGGGAATGGAAAAACAGTGGAGAGGGAGATGAAGGAGACGAAAGAGTTTTGGGGGGTGGAGAAGAAAGAAAGTGAGATGGAAAAGAGACGGCTGAAAAAGAAAAAGGAGAAAATAAGAAAACAGGAACTGGAGAGGTGAATCATTAGAGAAGAAAAGAGAGATACAGGAAAGAACATTGCGTTTGAATGACTGGAGATGGGAGGTTTGATAAGTTTTGACTGACTGACTGATAGGGATATCAGATAAGACATGATAAGACACAGAGATAAGACATGACCAAAGAAAACACACAATTGCTCATAGACAGATAGATAGATAGCTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_00524568_00527858.mRNA True 1861 mRNA 0.46 4 523876 528298

Neighbor

gene id symbol gene type direction distance location
CI01000113_00455243_00457236 NA coding upstream 65182 454875 ~ 458694 (+)
CI01000113_00428584_00446187 RHBDF1, RHBDF1A coding upstream 77232 428260 ~ 446644 (+)
CI01000113_00370404_00370736 NA coding upstream 150892 370404 ~ 372984 (+)
CI01000113_00342143_00354071 NPRL3 coding upstream 169574 341732 ~ 354302 (+)
CI01000113_00326077_00326875 BA2, BA1 coding upstream 196908 325609 ~ 326968 (+)
CI01000113_00568754_00569821 S1PR2 coding downstream 40112 568410 ~ 570516 (+)
CI01000113_00574016_00587822 DNMT1 coding downstream 45157 573455 ~ 588082 (+)
CI01000113_00629848_00638123 ANGPTL6 coding downstream 100545 628843 ~ 638432 (+)
CI01000113_00645261_00649236 NA coding downstream 116963 645261 ~ 649815 (+)
CI01000113_00659612_00684227 TRIP10, TRIP10A coding downstream 131314 659612 ~ 685030 (+)
G331354 NA non-coding upstream 5722 517802 ~ 518154 (+)
G331353 NA non-coding upstream 6119 517286 ~ 517757 (+)
G331270 NA non-coding upstream 10343 489840 ~ 513533 (+)
G331276 NA non-coding upstream 10814 493856 ~ 513062 (+)
G331283 NA non-coding upstream 18342 498655 ~ 505534 (+)
G331358 NA non-coding downstream 388 528686 ~ 528932 (+)
G331359 NA non-coding downstream 5779 534077 ~ 534313 (+)
G331360 NA non-coding downstream 6645 534943 ~ 535281 (+)
G331391 NA non-coding downstream 176215 704513 ~ 704739 (+)
G331397 NA non-coding downstream 186148 714446 ~ 714897 (+)
G331260 NA other upstream 189255 334158 ~ 334621 (+)
G331470 NA other downstream 385094 913392 ~ 916537 (+)
G331487 NA other downstream 389437 917735 ~ 922133 (+)
G331615 NA other downstream 717993 1246291 ~ 1246573 (+)
CI01000113_01424978_01425704 NA other downstream 896263 1424968 ~ 1425835 (+)
G331767 NA other downstream 1134487 1662785 ~ 1663255 (+)

Expression


Co-expression Network