G331283


Basic Information

Item Value
gene id G331283
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 498655 ~ 505534 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU376579
CAGTAATGTTGAGAGGATCTGATGTGACTTTAGGAGGAGGTTGAGGTCCTTCTGCTCCCAGTTCCAGCTCTGCTTCACACCTGTACTGAGCTCCATCATCAGATCTGTCTGGACGGATCATGAGTGTGACTGTTTTATTCACTGGAGTCTTGATGGTGTCAGTGAAGTTGGTTTGATCCACCAGAGTCTGTCCTTTGTACCATTTGACAGTGAGATACCGAACAGAAGCCACATAAAGAACGTCACACTGGAGTTTATACTGCTGGCCCGTTGTCATTGGTCCTTTATGATCCCCAGCACTGATGGAAATATCTGGAAGACCTATTAAGCAATAACAATAGAGTAACTACAAATGCTTCACAATGTTGCATCTCAAAAACAAAAATTGGTAACACTTTACAATAAGGTTCATTAGTTAAACATTAGTTAATGTATTAACATGAACTAACCATGAACAATACATTTGTTACTGTATTTACTAATCTTCATTAACGTTAGTTCTTTTGTTTCGACTCAGTGGTTCGGAGCGTGTATCAAACTGCCAAAGTCACGTGAACTATTGAAGTTTCAAAACACTTATGACATAACAAAGCCTTGTTTACTGAAATCATGTGATTTTGGTGCTCTGATCCACCGATTCGAAACAAAAGATTTGTAAAGCTTCATGAAGCAGTGTTTCGAAATCGCCCATCACTAGATATTGTTGAATAAAGTTGCTATTTTTGTTATTTTTGGCGCACAAAAAGTATTCTCGTCGCTTGATAATATAAAGGTTAAACCACTGTAGTCACATGAACTGTTTTAAATATGTCTTTAGTAGCTTTCTGGGCATTGAAAGTGTTAATTATCTTGCTGTCAATAGAGGCCTCACTGAGCCATCGGATTTCATCAAAAATATCTTAATTTGTGTTCCGAAGATGAACGAAGGTCTTATGGGTGTGGAACGACATGAGGGTGAGTAATTAATGACATTTTCATTTTTGGGTGAACTAACCCTTTAAGCTGACACAAGGTAGCTAGTTTGTAGCTGGTATGTTGCAACTGTTGCTCTTTGACCACCAATGACCATCAACCATGTTTCAAAGCACAGTCACCATTTTAAGATGTCTTTTCCAACACACTGGCCTTTGCTTCCATTCTGTGAAATTCTTAACTTCCTATTTTGTATTGTGAGCAGTGTGGTATTTCCAGTGAATGGTGGTGAGCATATTTAGTCCATTAGATTGAAAGATCTGAAAAAGCCAATACTATTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU376579 True 1255 lncRNA 0.38 2 498655 505534

Neighbor

gene id symbol gene type direction distance location
CI01000113_00455243_00457236 NA coding upstream 39961 454875 ~ 458694 (+)
CI01000113_00428584_00446187 RHBDF1, RHBDF1A coding upstream 52011 428260 ~ 446644 (+)
CI01000113_00370404_00370736 NA coding upstream 125671 370404 ~ 372984 (+)
CI01000113_00342143_00354071 NPRL3 coding upstream 144353 341732 ~ 354302 (+)
CI01000113_00326077_00326875 BA2, BA1 coding upstream 171687 325609 ~ 326968 (+)
CI01000113_00524568_00527858 NA coding downstream 18342 523876 ~ 528298 (+)
CI01000113_00568754_00569821 S1PR2 coding downstream 62876 568410 ~ 570516 (+)
CI01000113_00574016_00587822 DNMT1 coding downstream 67921 573455 ~ 588082 (+)
CI01000113_00629848_00638123 ANGPTL6 coding downstream 123309 628843 ~ 638432 (+)
CI01000113_00645261_00649236 NA coding downstream 139727 645261 ~ 649815 (+)
G331290 NA non-coding upstream 89643 405376 ~ 409012 (+)
G331349 NA non-coding upstream 109581 388841 ~ 389074 (+)
G331347 NA non-coding upstream 123071 375318 ~ 375584 (+)
G331344 NA non-coding upstream 131747 366643 ~ 366908 (+)
G331353 NA non-coding downstream 11752 517286 ~ 517757 (+)
G331354 NA non-coding downstream 12268 517802 ~ 518154 (+)
G331358 NA non-coding downstream 23152 528686 ~ 528932 (+)
G331359 NA non-coding downstream 28543 534077 ~ 534313 (+)
G331360 NA non-coding downstream 29409 534943 ~ 535281 (+)
G331260 NA other upstream 164034 334158 ~ 334621 (+)
G331470 NA other downstream 407858 913392 ~ 916537 (+)
G331487 NA other downstream 412201 917735 ~ 922133 (+)
G331615 NA other downstream 740757 1246291 ~ 1246573 (+)
CI01000113_01424978_01425704 NA other downstream 919027 1424968 ~ 1425835 (+)
G331767 NA other downstream 1157251 1662785 ~ 1663255 (+)

Expression


Co-expression Network