G331353


Basic Information

Item Value
gene id G331353
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 517286 ~ 517757 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU376652
ATAACAAAGGGGGTGGGGGGAAATCCCCACTGTAAGTGAAAGTGAAAGTGAAAGTGACATGATGTGTGGCCAAGTATGGTGTCCCTGTCCCATACTTGGAATTTGTGCTCTGCATTTCACCCATACAAGTGCACACACGCAGCAGTGAGTATTGAACACACACACCCAGAGCAGTGGGCAGCCATTTTTGTTCTGGCAATTGGGGGCCTTGCTCAAAGGCGGTTGTGGGTAATAAGAGTGGAAGACCACTAGGGCACAACTGCCCGAGTAAATAAATGCAGTGAAAACAGTGAGGATCCAGAGCTGCTTGATCAAGTTTGAGGACTGGAACTAACAGTTGAATAAATCATTAATCTAAGAGCCTGCATAGCAAACTGAGGTAACAAATATAGACTTAAAGGGTTAGTGCAACCAAAAATAAAAATTCTGTCATTAATTACTCACCCCCATGTCGTTCCACACCCGTAAGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU376652 True 472 lncRNA 0.45 1 517286 517757

Neighbor

gene id symbol gene type direction distance location
CI01000113_00455243_00457236 NA coding upstream 58592 454875 ~ 458694 (+)
CI01000113_00428584_00446187 RHBDF1, RHBDF1A coding upstream 70642 428260 ~ 446644 (+)
CI01000113_00370404_00370736 NA coding upstream 144302 370404 ~ 372984 (+)
CI01000113_00342143_00354071 NPRL3 coding upstream 162984 341732 ~ 354302 (+)
CI01000113_00326077_00326875 BA2, BA1 coding upstream 190318 325609 ~ 326968 (+)
CI01000113_00524568_00527858 NA coding downstream 6119 523876 ~ 528298 (+)
CI01000113_00568754_00569821 S1PR2 coding downstream 50653 568410 ~ 570516 (+)
CI01000113_00574016_00587822 DNMT1 coding downstream 55698 573455 ~ 588082 (+)
CI01000113_00629848_00638123 ANGPTL6 coding downstream 111086 628843 ~ 638432 (+)
CI01000113_00645261_00649236 NA coding downstream 127504 645261 ~ 649815 (+)
G331270 NA non-coding upstream 3753 489840 ~ 513533 (+)
G331276 NA non-coding upstream 4224 493856 ~ 513062 (+)
G331283 NA non-coding upstream 11752 498655 ~ 505534 (+)
G331290 NA non-coding upstream 108274 405376 ~ 409012 (+)
G331349 NA non-coding upstream 128212 388841 ~ 389074 (+)
G331354 NA non-coding downstream 45 517802 ~ 518154 (+)
G331358 NA non-coding downstream 10929 528686 ~ 528932 (+)
G331359 NA non-coding downstream 16320 534077 ~ 534313 (+)
G331360 NA non-coding downstream 17186 534943 ~ 535281 (+)
G331391 NA non-coding downstream 186756 704513 ~ 704739 (+)
G331260 NA other upstream 182665 334158 ~ 334621 (+)
G331470 NA other downstream 395635 913392 ~ 916537 (+)
G331487 NA other downstream 399978 917735 ~ 922133 (+)
G331615 NA other downstream 728534 1246291 ~ 1246573 (+)
CI01000113_01424978_01425704 NA other downstream 906804 1424968 ~ 1425835 (+)
G331767 NA other downstream 1145028 1662785 ~ 1663255 (+)

Expression


Co-expression Network