G331354


Basic Information

Item Value
gene id G331354
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 517802 ~ 518154 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU376653
ACAGGAGGTTTTTTTATCCCCCATAGAAAGCAACATCATTTCCACATTCAAGATCCAGAAAAGAGACATTGTTAAAATAGTCAATGTGACAAAACAAAAATAAACAAAACAATAAAATATTGACTTTATTCAACAGTTTCTTCTGTACCCTGTCATTCTCCTACGCTGTTTACGTTGTAGTGCAGCGCTTCCAGGTTTTAAAATGAATTGAATATTGAATAAAGTCGTTATTTTTGTTTTGTTTTTTTGCGCACAAAAAGTATTCTTGTCGCTTCATAACATTAAGGTTGAACCACTGTAGTCATGTTGACTATTTTAACGATGTCTACTACTTTTCTGGACCTTGAATGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU376653 True 353 lncRNA 0.33 1 517802 518154

Neighbor

gene id symbol gene type direction distance location
CI01000113_00455243_00457236 NA coding upstream 59108 454875 ~ 458694 (+)
CI01000113_00428584_00446187 RHBDF1, RHBDF1A coding upstream 71158 428260 ~ 446644 (+)
CI01000113_00370404_00370736 NA coding upstream 144818 370404 ~ 372984 (+)
CI01000113_00342143_00354071 NPRL3 coding upstream 163500 341732 ~ 354302 (+)
CI01000113_00326077_00326875 BA2, BA1 coding upstream 190834 325609 ~ 326968 (+)
CI01000113_00524568_00527858 NA coding downstream 5722 523876 ~ 528298 (+)
CI01000113_00568754_00569821 S1PR2 coding downstream 50256 568410 ~ 570516 (+)
CI01000113_00574016_00587822 DNMT1 coding downstream 55301 573455 ~ 588082 (+)
CI01000113_00629848_00638123 ANGPTL6 coding downstream 110689 628843 ~ 638432 (+)
CI01000113_00645261_00649236 NA coding downstream 127107 645261 ~ 649815 (+)
G331353 NA non-coding upstream 45 517286 ~ 517757 (+)
G331270 NA non-coding upstream 4269 489840 ~ 513533 (+)
G331276 NA non-coding upstream 4740 493856 ~ 513062 (+)
G331283 NA non-coding upstream 12268 498655 ~ 505534 (+)
G331290 NA non-coding upstream 108790 405376 ~ 409012 (+)
G331358 NA non-coding downstream 10532 528686 ~ 528932 (+)
G331359 NA non-coding downstream 15923 534077 ~ 534313 (+)
G331360 NA non-coding downstream 16789 534943 ~ 535281 (+)
G331391 NA non-coding downstream 186359 704513 ~ 704739 (+)
G331397 NA non-coding downstream 196292 714446 ~ 714897 (+)
G331260 NA other upstream 183181 334158 ~ 334621 (+)
G331470 NA other downstream 395238 913392 ~ 916537 (+)
G331487 NA other downstream 399581 917735 ~ 922133 (+)
G331615 NA other downstream 728137 1246291 ~ 1246573 (+)
CI01000113_01424978_01425704 NA other downstream 906407 1424968 ~ 1425835 (+)
G331767 NA other downstream 1144631 1662785 ~ 1663255 (+)

Expression


Co-expression Network