G331358


Basic Information

Item Value
gene id G331358
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 528686 ~ 528932 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU376657
CTCTACTGTACATACATTTTGTTTTTGAGGGGTCACAAGGGTAAGTGGCTTTAAAAGATGGAACACCATGGTGCTCTGCTATGTGGGAAACGATAGAGGGAATAGTTTCAGGTCTGTTTGGGATAATTGGACTGCGTCCCTCAGCTGGAACCCATGATGACTGTGTGTGCAAAAAGAGGGGAGTTTGCTAGGCCTTGGTGCTGGGGTAAGTCTGGTTCCCATTAGACCAGAGGCCCGGGGGTCGGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU376657 True 247 lncRNA 0.49 1 528686 528932

Neighbor

gene id symbol gene type direction distance location
CI01000113_00524568_00527858 NA coding upstream 388 523876 ~ 528298 (+)
CI01000113_00455243_00457236 NA coding upstream 69992 454875 ~ 458694 (+)
CI01000113_00428584_00446187 RHBDF1, RHBDF1A coding upstream 82042 428260 ~ 446644 (+)
CI01000113_00370404_00370736 NA coding upstream 155702 370404 ~ 372984 (+)
CI01000113_00342143_00354071 NPRL3 coding upstream 174384 341732 ~ 354302 (+)
CI01000113_00568754_00569821 S1PR2 coding downstream 39478 568410 ~ 570516 (+)
CI01000113_00574016_00587822 DNMT1 coding downstream 44523 573455 ~ 588082 (+)
CI01000113_00629848_00638123 ANGPTL6 coding downstream 99911 628843 ~ 638432 (+)
CI01000113_00645261_00649236 NA coding downstream 116329 645261 ~ 649815 (+)
CI01000113_00659612_00684227 TRIP10, TRIP10A coding downstream 130680 659612 ~ 685030 (+)
G331354 NA non-coding upstream 10532 517802 ~ 518154 (+)
G331353 NA non-coding upstream 10929 517286 ~ 517757 (+)
G331270 NA non-coding upstream 15153 489840 ~ 513533 (+)
G331276 NA non-coding upstream 15624 493856 ~ 513062 (+)
G331283 NA non-coding upstream 23152 498655 ~ 505534 (+)
G331359 NA non-coding downstream 5145 534077 ~ 534313 (+)
G331360 NA non-coding downstream 6011 534943 ~ 535281 (+)
G331391 NA non-coding downstream 175581 704513 ~ 704739 (+)
G331397 NA non-coding downstream 185514 714446 ~ 714897 (+)
G331405 NA non-coding downstream 194855 723787 ~ 724001 (+)
G331260 NA other upstream 194065 334158 ~ 334621 (+)
G331470 NA other downstream 384460 913392 ~ 916537 (+)
G331487 NA other downstream 388803 917735 ~ 922133 (+)
G331615 NA other downstream 717359 1246291 ~ 1246573 (+)
CI01000113_01424978_01425704 NA other downstream 895629 1424968 ~ 1425835 (+)
G331767 NA other downstream 1133853 1662785 ~ 1663255 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G18608 NA non-coding NC_056701.1 CM032070.1 9646313 ~ 9646566 (-)