XLOC_011894 (BX296541.1)


Basic Information

Item Value
gene id XLOC_011894
gene name BX296541.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 7504109 ~ 7505978 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023504
GTTTTTACAGAGTGAAGAGAGATGATGTGTTAGTAACTCATCCCTTGACCTGCACTGATTCTGACCGTCAGACCCTCATCAGTCAGAGAGTCAAAGATAAACACAAAACGAGCATGAAAAAGAAATGTGAGAATTTATTTGAGGGAAACAAACTAGAAGAGAAccaaaccctcctgaacagcatctacacacagctctacatcatagagggagagagtgaaggagtgaatgaagaacatgaggttttacagatggagagaACAGCCAGAACACAAGACACTCCAATCTACTGCAGTGACATCTTTAAACCCTTACAAGAACCAGAACATGAGGAGAAAGACCaaatcaagactgttctcactaaaggcatcgctggaattggaaaaaccgtctctgtgcagaagtttaTTCTAGACTGGAGTGAAGGAAAAGCCagtcaggatgtagatttcatgtttgtgcttccatttcgagagctgaacttgattaaagatcatcagtacagtcttcacagacttctgctggactttcatcctgaacttcaAGATCTGGACTCAGAGATGTATGAGGAGTGTAAAGtcgtgttcatctttgatggtctggatgaaagcagaatcacactgaaGTTTTCAGACATTGAGAGAGTTAGTGATGTGAATGAGTCTTCATCAGTAGCTGTGTTGATGTCAAACCTCATCAgaggagatctgcttccctctgctcacatctggatcacctccagaccagcagcagccaatcagatcccTTCAAAATACATCAGCCGtctgacagaaattcagggattCAATGAttctcagaaggaggaatatttcaggaagagaatcagtgaTGTGGGTCAAGCCAGaagaatcatctcccacatcagaagatCCAGAAGCCTCCACATCATGTgtcacatacccgtcttctgctggatctcagccactgtgcttcagaagctcctgaaTGAAGATGACAgagcagaaatccctcaaactctgactgaaatgtacatccacttcctgctgactcagatcaacatgaggaaccagaagtatgaagagagagatccagagagaCTTCTGAAGTCCAGCAGAGACATGATTGTGAAACTCGCTGAACTGGCTTTCAatcagctgatgaagggcaatgtgatgttctatgaagaggacctgattgagagcggcatagaTGTCACTGGCgcctcagtgtattctgggatttGCACTGAGATACtaaaggaggaatctgtgattcatcagaggaaagtctacagcttcctTCATCTGAGCTTTCAGGAGTTCCTCTCtgctttttgtgtgtttaactcGCAATTAGTTGAGAAtgagaaaaacttttttttgcactCTCGACAtcagttgtacagtcattgcAACCCTTTGTATAAGCGTGTAAAATCAGCAGTTGATGAATCCTTACAGAGTGGAAATGGACATCTGGATCTTTTCCTGAGGTTTCTGCTGGGTATCTCACTGAactccaatcagagactcttacAGGATTTATTGACATGCACAGAGAAGAGCTTAGAAACCATCAAGAGAATCACAggatacattaaaaataaaatcaaaggtgATGAACATCTCTCAGCTGGCAGAtgcatcaatctgttcctctgtctgctggaaaTGAAGGATCAGACTCTGTACAGAGAGATTCAGAAGTTTGTGAAATCACAGACTCCCTCAGTGAAGAATCTCTCTCCATCTCACTGCTCAACTATCATCTACATGCTTCAGATATCAGAGGAGGCGCTGAATGATGAGTTTGATCTGAAGAAATACAAAACATCAGATGAGGGCAGAAGGAGACTGATACCAGCTGTGGTGAACTGCAGAAAAGCTCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000089839

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023504 True 1870 unprocessed_pseudogene 0.43 1 7504109 7505978

Neighbor

gene id symbol gene type direction distance location
XLOC_011893 si:ch211-278p9.3 coding downstream 2193 7489235 ~ 7501916 (-)
XLOC_011891 si:ch211-278p9.1 coding downstream 19755 7440458 ~ 7484354 (-)
XLOC_011892 NA coding downstream 37757 7464840 ~ 7466352 (-)
XLOC_011890 grm1b coding downstream 63712 7380550 ~ 7440397 (-)
XLOC_011889 rab32b coding downstream 132545 7364911 ~ 7371564 (-)
XLOC_011895 NA coding upstream 3080 7509058 ~ 7534318 (-)
XLOC_011896 BX511121.1 coding upstream 137553 7643531 ~ 7711939 (-)
XLOC_011897 stx11a coding upstream 221486 7727464 ~ 7733037 (-)
XLOC_011898 zbtb2a coding upstream 280268 7786246 ~ 7792376 (-)
XLOC_011899 rmnd1 coding upstream 289581 7795559 ~ 7818991 (-)
XLOC_011884 CU469532.1 non-coding downstream 545379 6958610 ~ 6958730 (-)
XLOC_011871 NA non-coding downstream 1222469 6224873 ~ 6281640 (-)
XLOC_011868 CU571076.1 non-coding downstream 1490438 6013555 ~ 6013671 (-)
XLOC_011867 NA non-coding downstream 1536763 5967249 ~ 5967346 (-)
XLOC_011901 NA non-coding upstream 675743 8181721 ~ 8182704 (-)
XLOC_011904 BX248131.1 non-coding upstream 860727 8366705 ~ 8366816 (-)
XLOC_011906 CU462878.1 non-coding upstream 1016928 8522906 ~ 8523030 (-)
XLOC_011866 NA non-coding downstream 1530698 5961811 ~ 5973411 (-)

Expression


Co-expression Network