XLOC_012056 (tmem26a)


Basic Information

Item Value
gene id XLOC_012056
gene name tmem26a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 20942058 ~ 20958153 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023784
GGGAGGTTTCAATTCAAGTCAACTCAAACCGGGACTCAACGGGACCCACAAGCGCACTTTAAAACCGCACGAGCCCGGGACGCTGCTCACTTTACGATGATTTTAGTCAAATTCGTGTGCGCGATCATAACCAGGTCATTGTTCATCCTGGTCTCTCTCATCGGCGTCTGGAGAGTGAAAACGGTGAAAAATGACAACATGTACTGGTTACTTACCATCCTTTACCTTCCTCTGGTCGTGGAGATGATCATCACTTTAAAACGAAGGAAAGGGCAAGACTACAAATGGTTTTCTCCAGccatcctcctcttcctcatcaGTATTATTCCATCTATATGGATTCTGGAGTTACACCATCAGGAGAACAAAGCCAGTGACCCACAGTGTAGGAAACTGGACTCTTGGGACAATGTCAAGAGCATATTACCATCTAACGGCACTATGGGCAATGCAACACTAAAGTATCTGGAGAGCATGCTGACCTCCGTCTGTGCGAATGACTGGATCCTTGCCCTTCATCAGGTTCTACTCATTCTACTCATCCTTGGAAAGTGGCTCCTTCCATTAGGGGGCGGAGTAACACGTGACGAGTTGTCACAGCTTCTGCTCATCTTTGTGGGCACGGCAGCAGACATTCTGGAATTCACCAGCGAAACTCTGTCTGATGTCAAGGAGAACAACCATCAGCTGGTGTATATAATCTTGGCAGTGTGGACGTGGAGCATGTTACAGTTTCCTTTGCACCTCGCAGTTGTGACGTCCCGCCCAGAGAACACAGATGAGCCCAAAGGTGGAGACGGCTGCTGTAACCTGATCTTGTCGAGACACAGCACAGACATTTGGAACATCGTAGAGAGTTTGTTCATCCAGGACGGGCCGTTTCTGGTAGTGCGTTTGATTGTGATGATATACTTTGATGTTTTCCACCAGATGCTGGTCTTCTTCGCTATTAAGAACTTTCTAGTGGTGGTTCTCAACCTTTACAGGCTCATCGTCATCTGTCAGGACTTTAGACCAAAACCACCATCATCATCTTCCTCTGTCCCGATCTGAGGAAGGAGGAGTTCAAAATTACCTTTTAACTTCTAAAATACTGATAGAGATGCATCCTTATGGCTTTCAAACAGGAGTTTTATtgtcttctttttgtttttttaatattttttatgtttagtttatCAAATTAAATAGAACGTAGAAATGCTTCACTAGCTAGCCCAACTTTTATACATATTTCTAATAATTTCAAGTACTTTTTATTAACTTCATGAATAATGAGAATAAAGTCATTCTacgtaaaatacatttatttaaaaataaatgaagataataaaa

Function

symbol description
tmem26a Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM26 (transmembrane protein 26).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-101223-2 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM26 (transmembrane protein 26).

Ensembl:

ensembl_id ENSDARG00000077979

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023784 True 1335 mRNA 0.43 6 20942058 20958153

Neighbor

gene id symbol gene type direction distance location
XLOC_012055 NA coding downstream 18530 20900590 ~ 20923528 (-)
XLOC_012053 ank3a coding downstream 44651 20701582 ~ 20897407 (-)
XLOC_012054 BX927186.1 coding downstream 238761 20703179 ~ 20703297 (-)
XLOC_012052 ccdc6a coding downstream 246060 20673963 ~ 20695998 (-)
XLOC_012051 NA coding downstream 268167 20670398 ~ 20673891 (-)
XLOC_012057 phyhipla coding upstream 5324 20963477 ~ 20979077 (-)
XLOC_012058 bicc1a coding upstream 25645 20983798 ~ 21049260 (-)
XLOC_012059 ube2d1a coding upstream 92869 21051022 ~ 21057674 (-)
XLOC_012060 vsx1 coding upstream 105250 21063403 ~ 21066105 (-)
XLOC_012061 AL929290.1 coding upstream 172108 21130261 ~ 21130377 (-)
XLOC_012049 NA non-coding downstream 330174 20610476 ~ 20611884 (-)
XLOC_012038 NA non-coding downstream 970014 19967166 ~ 19972044 (-)
XLOC_012063 NA non-coding upstream 255269 21213422 ~ 21220479 (-)
XLOC_012073 NA non-coding upstream 905502 21863655 ~ 21864182 (-)
XLOC_012082 NA non-coding upstream 1526652 22484805 ~ 22504384 (-)
XLOC_012083 BX511218.1 non-coding upstream 1563483 22521636 ~ 22525745 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000189_03687102_03695400 TMEM26A coding CI01000189 null 3685658 ~ 3695405 (+)