XLOC_012082



Basic Information


Item Value
gene id XLOC_012082
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 22484805 ~ 22504384 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00024894
ACATTTACACACGTATACGCACTGTCCAGGAACATTTTTACACATATACACTGCCATTGTTTACAACATAAAGCCTAGATTTTCACGGGACACATTAATGCAAGATGTTAGTGAGGCCTTGGAGTGGAGAGttagaggagagagagagagagagatgggaaGAGGAGGAAATAATATTATCAAAGATTAGTATTAAACCCCTGAAAGGCTAGAGTCCATCTGAGCAGTGAGGAAGAGAGAGAGGGGTTAGGAATGTAAGACAAACCCTGAcgctttacatacacacacattcttcTAACGTTTTACAGACATTTTCCAGATGGTtcacttgttttttgttttttttttggagcagAAATATCACAATTTCTACGTTCCCTTAATTCTTACAAACATCAgactgctcaaacacacacacacacacacactcaaacaaaaaGT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00024894 True 441 lncRNA 0.39 2 22484805 22504384

Neighbor


gene id symbol gene type direction distance location
XLOC_012081 CU104709.1 coding downstream 160078 22319080 ~ 22324727 (-)
XLOC_012080 mrps5 coding downstream 347606 22107702 ~ 22137199 (-)
XLOC_012079 ttbk1b coding downstream 417354 22032296 ~ 22067451 (-)
XLOC_012078 zmp:0000001102 coding downstream 463592 22014345 ~ 22021213 (-)
XLOC_012077 slc22a7b.1 coding downstream 474137 22002857 ~ 22010668 (-)
XLOC_012083 BX511218.1 coding upstream 17252 22521636 ~ 22525745 (-)
XLOC_012084 si:ch211-125o16.4 coding upstream 40264 22544648 ~ 22552678 (-)
XLOC_012085 exo1 coding upstream 59452 22563836 ~ 22573402 (-)
XLOC_012086 NA coding upstream 182786 22687170 ~ 22689787 (-)
XLOC_012087 BX548077.1 coding upstream 281790 22786174 ~ 22786291 (-)
XLOC_012073 NA non-coding downstream 620623 21863655 ~ 21864182 (-)
XLOC_012063 NA non-coding downstream 1264326 21213422 ~ 21220479 (-)
XLOC_012061 AL929290.1 non-coding downstream 1354428 21130261 ~ 21130377 (-)
XLOC_012055 NA non-coding downstream 1561277 20900590 ~ 20923528 (-)
XLOC_012054 BX927186.1 non-coding downstream 1781508 20703179 ~ 20703297 (-)
XLOC_012088 BX511309.1 non-coding upstream 420825 22925209 ~ 22925337 (-)
XLOC_012093 NA non-coding upstream 978675 23483059 ~ 23485336 (-)

Expression



Co-expression Network