XLOC_012073



Basic Information


Item Value
gene id XLOC_012073
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 21863655 ~ 21864182 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00024539
attttttttctcttttaatgcAAATATCAACGATTAAACAGGTCCTCCCTCAGACGACCCCTGCTACCGTTATACAGTACTAGATGATGCTTGGAGAGCCACAACTTATAATGAATCAATCATAAACTGTGACACAGCTGTGAAATGGTTTGGCTGGTATCGTCTCTTCATCTATGGCCAGAGTGTCCAGATGCCAGACAGATGTGTTGATAAGTACAGATGTGGCACTCACGCCCCCCTGTGGTTAAATGGTCAACACCCAAAAGTTGGAGATGGAGTGGTGACCCGAGATGTCTGTGGTCACTGGTTGAGTGACTGCTGTTATTACAGATCTGCTCCCATTAGAGTGAAAGCCTGTCCTGGAGGTTATTATGTCTATGAGTTTGTTGAGCCACCCGCCTGCAATCTTGCATACTGTGCAGATGTTGAAAAGCCCAACACCAGCTATACAACTG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00024539 True 455 lncRNA 0.45 2 21863655 21864182

Neighbor


gene id symbol gene type direction distance location
XLOC_012072 cuzd1.2 coding downstream 4491 21833719 ~ 21859164 (-)
XLOC_012071 si:ch211-208g24.8 coding downstream 31465 21826825 ~ 21832190 (-)
XLOC_012070 hmx3a coding downstream 70542 21790606 ~ 21793113 (-)
XLOC_012069 hmx2 coding downstream 79503 21782043 ~ 21784152 (-)
XLOC_012068 gpr26 coding downstream 246037 21607239 ~ 21617618 (-)
XLOC_012074 cuzd1.1 coding upstream 5862 21870044 ~ 21884323 (-)
XLOC_012075 slc22a7b.3 coding upstream 118435 21982617 ~ 21993707 (-)
XLOC_012076 slc22a7b.2 coding upstream 129861 21994043 ~ 22001935 (-)
XLOC_012077 slc22a7b.1 coding upstream 138675 22002857 ~ 22010668 (-)
XLOC_012078 zmp:0000001102 coding upstream 150163 22014345 ~ 22021213 (-)
XLOC_012063 NA non-coding downstream 643176 21213422 ~ 21220479 (-)
XLOC_012061 AL929290.1 non-coding downstream 733278 21130261 ~ 21130377 (-)
XLOC_012055 NA non-coding downstream 940127 20900590 ~ 20923528 (-)
XLOC_012054 BX927186.1 non-coding downstream 1160358 20703179 ~ 20703297 (-)
XLOC_012051 NA non-coding downstream 1189764 20670398 ~ 20673891 (-)
XLOC_012082 NA non-coding upstream 620623 22484805 ~ 22504384 (-)
XLOC_012083 BX511218.1 non-coding upstream 657454 22521636 ~ 22525745 (-)
XLOC_012086 NA non-coding upstream 822988 22687170 ~ 22689787 (-)
XLOC_012087 BX548077.1 non-coding upstream 921992 22786174 ~ 22786291 (-)
XLOC_012088 BX511309.1 non-coding upstream 1061027 22925209 ~ 22925337 (-)

Expression



Co-expression Network