XLOC_012074 (cuzd1.1)


Basic Information

Item Value
gene id XLOC_012074
gene name cuzd1.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 21870044 ~ 21884323 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023814
AAGCTTGGTCAGAAGAGAAAGATGGAAGCTCTGAATATTCTTCTGCTTCTAATTGGCTTTTATGCAAATGCTGCTCAGTCATACTGGACAACAGcaGACTATGACTGGTGGTATTCCACTGACGAGACAATCACTACACCTTTGCCCTCCTGCAGATACAACTGTGGATACAACCTCGGCAGCTGTTCATGCCGCGGCAACTGTCACACCTATGGCGACTGTTGCCCTGACTACGACAACCATTGCGATATGATCACCGATTGGCCGGATACAACAGCTGGCGAACGTTCCTGCAAAAATAACTGTGGAGCATTACTTCCTCTCTGCGGATGTGATTCTACTTGCCAGACCCACAGGGATTGTTGCCCTGACTATGACACCTACTGCTCAGCAACACCATACACAACAGCAGAACCAGACACTCACTGGCCATATACAGGTTTTCCCTCCTGCATGTATAATTGTGGATACAACTTCAGCAGCTGCTCGTGCAACTTGGACTGTCGGTATTACAACAACTGTTGCCCTGACTATCACTGGTATTGCCCATCATACacaacaaataatccagTTACTCACCCTAAGTGTGGAGGACATCTGTATGGTGCTGGGATGTTTTCCACTCCAAACTACCCAAGCTATTACCATGACAATGCCTACTGTGTGTGGTACCTTTCTGCTCAGCAAGGACAGAGGATCTTCTTGACATTTGCTGATGTGCAACTGGAGCGCTGCTGTGACTGTGACTACATTACCATTTATGACGGCTCTTCCACTGGTCATCAACAGTTGGGAAAGGTCTGCTCAAATGAGACCACACATCAGGCATTTCACTCTTCCTCACGATACTTGACTGTTGTTTTCAGGAGTGATTACACTAGTGTCAGCCATGGGTTCAAGGCCCATTTCACCAGCTCTCTGACTGCAGATCAAGGTCGTGTGGATTGTTCCTCAGACAACATGATCATTGTTCTTCGAAGGTCTTATCTGAACTCATTGGGATTTAGTGGAAATGACCTTTATGTGGATGACCGTCTCTGCAGACCAAACATTAGCAGCACTGAAGTTGTGTTCAGATTCCCCCTCAACACATGTGGAACCGCCAAAAAGATGATGAACAGTTTTGTGTCCTACACCAACAATGTGCGGGCATCTCCATCTCAGTCGGGTGTAATCACTCGTCAGTCAGAGTTTCTTCTGAGTGTGGGCTGCCGAATGGAGCCGGACACTATTGTGCAGATCTTCTACGAGGCCAAAGAAATCCCCAATGGCAACATCACAGGAACGGGCCGCTTCAATGCCAGCATTGCCTTCTACACCTCCAGAAAGTTCAACCAGCAGATTTACGACTCTCCATATGAAGTGTTCCTGAATGACGATCTGTTTGTTCAAGTCAAGCTAACCAGATTTGATGCAAGCCTGGATCTCTTCTTGGAGACTTGCGTAGCATCTCCAAATCCAAATGACTTTAAAGATCATTCCTATGACCTGCTGCGTAATGGATGTCCCAGAGACAGCACATTTCAATCCTATATCAATGGCGTGGATCAATATGCTCAGTTCAGTTTCCGGGCTTTTAAGTTCCTCCAGACTCATGCCTTTGTGCACCTGCAGTGTAAGGTGATCATCTGCCCTGACAATGATTACAACTCTCGCTGCCGTAAAGGTTGCCAATATCGGCGCAAGAGATCCCTTGGCAGCTCCTACAACTCCAGTACTGTGACGTTGGGCCCGATTAAACTCAGGGGTCAGAGTGCAGGACGAAGACATGGTGTGGAATCAGAGAAGTCTAAGGAATGATCTGGAATAGAGGGAGTGACCCAGATCATCTTCTCAATCAATGACATAATCTTTAATGTTAATCCCTATTAACCACCCAGCAAATGAATCTTAAGGCAATTTCTTATTATAATTCAATAAAGCATTTCTAAACT

Function

symbol description
cuzd1.1 Orthologous to human CUZD1 (CUB and zona pellucida like domains 1).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131122-16 Orthologous to human CUZD1 (CUB and zona pellucida like domains 1).

Ensembl:

ensembl_id ENSDARG00000089050

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023814 True 1934 mRNA 0.46 15 21870044 21884323

Neighbor

gene id symbol gene type direction distance location
XLOC_012073 NA coding downstream 5862 21863655 ~ 21864182 (-)
XLOC_012072 cuzd1.2 coding downstream 10880 21833719 ~ 21859164 (-)
XLOC_012071 si:ch211-208g24.8 coding downstream 37854 21826825 ~ 21832190 (-)
XLOC_012070 hmx3a coding downstream 76931 21790606 ~ 21793113 (-)
XLOC_012069 hmx2 coding downstream 85892 21782043 ~ 21784152 (-)
XLOC_012075 slc22a7b.3 coding upstream 98294 21982617 ~ 21993707 (-)
XLOC_012076 slc22a7b.2 coding upstream 109720 21994043 ~ 22001935 (-)
XLOC_012077 slc22a7b.1 coding upstream 118534 22002857 ~ 22010668 (-)
XLOC_012078 zmp:0000001102 coding upstream 130022 22014345 ~ 22021213 (-)
XLOC_012079 ttbk1b coding upstream 147973 22032296 ~ 22067451 (-)
XLOC_012063 NA non-coding downstream 649565 21213422 ~ 21220479 (-)
XLOC_012061 AL929290.1 non-coding downstream 739667 21130261 ~ 21130377 (-)
XLOC_012055 NA non-coding downstream 946516 20900590 ~ 20923528 (-)
XLOC_012054 BX927186.1 non-coding downstream 1166747 20703179 ~ 20703297 (-)
XLOC_012082 NA non-coding upstream 600482 22484805 ~ 22504384 (-)
XLOC_012083 BX511218.1 non-coding upstream 637313 22521636 ~ 22525745 (-)
XLOC_012086 NA non-coding upstream 802847 22687170 ~ 22689787 (-)
XLOC_012087 BX548077.1 non-coding upstream 901851 22786174 ~ 22786291 (-)
XLOC_012088 BX511309.1 non-coding upstream 1040886 22925209 ~ 22925337 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000592_00009406_00013240 NA coding CI01000592 null 9406 ~ 13364 (+)