XLOC_012078 (zmp:0000001102)


Basic Information

Item Value
gene id XLOC_012078
gene name zmp:0000001102
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 22014345 ~ 22021213 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023822
ATGAAGTTTGATAATATTCTGGATGAGACAGATGGCTTTGGCCGATACCAGATTGCACTTGTTATGCTGCTGTTCATACCTCGCATCACAATTCCGTGTCACTTCCTACTGAACAACTTCATCGCTGCCATCCCGTCTCATCACTGCGACATCAGCTCTCTGGATGCCGACGGGCTCGGGAATCTGACTCAGAAGGAGAGACTGATTGTAAGTGTTCCAGCACAAGAAGATGGGACTCCTGCTTCCTGTCACATGTTCGCACATCCTCAGTTTCAATTGCTGATAAACTCGTCCAGCAGCTCAGCTCTTCCAGTAGTGGAGTGTCAGAATGGATGGCACTTTGATAACAGCACCTTCATCAGCACTCTCGCCACACAGTTTGATTTAGTTTGTGACAAGAGGGGACTGGCCAAAGCATCAGCCACCATATTTTTTGTGGGTGTCATGTGTGGAGCTGTGTTCTTTGGAGTGCTCTGTGATAAGTATGGTCGGAGGAGCATGTTGCTGGTGTCTTATGTGTTTTCCATAGTGTTCAGTGTTACCAGCGCTTTCTCAAGCTCTTACATCATGTTTGCTGCCTTTCGCTTCCTAACCGGTTTAGCACTGACAGGAATCAGCAACATATCAGTGGTACTCAGTATTGAGTGGGTGGACACTAAGCACCGCACATTTATGGGTCTGTTCGGCAGTATGTCCTGGAGTATAGGCAACATGCTTCTGGCTGGTTTTGCTTTTATGGTCACTGATTGGAGGCTGCTGATTGTTATTGTCACTGCTCCTCTTTTTCTTGCTACAGCCACCTGGTGGTGGATCCCTGATTCAGCACGGTGGCTAATAGCCAATGGAAAGACAGAAACAGCATACAAGTATCTGCACAAATGTGCCACTTTTAACCAGAGACTAGACTTCACATCAAGAGTCAAGCCAGAGACTCTGTCCACTGTAGTGACTGTGGATCACCGCGGTCACAGTTACACTTACTTAGACCTAGTAAAAACTCCACAGCTGAGGAAACTCACACTCTTCACAGGAATAGTGTGGTATGGAGTTGCTTCTACATACTACGGCATCAGCTTAAACATCACAGGCTTTGGGCTTGATCCCTACCTGACACACTTCATTTATGCTGCCATAGAGGTGCCAGCGAAAATCCTCGTCTACTTCAGCCTCAACAAGGTGGGCCGCAGGAACACTCAGACTGGGACACTGGTGCTCACAGGATTCTGCATACTCATCAACATCATCACACCTACAGAATACTGGACATTTCGGACTGTAATTGCAGTGTTAGGGAAAGGACTATCAGAGGCTTCATTTACGACGGTGATTTTGTACACCACTGAGCTCTATCCTACAGTCATGAGGCAGAATGGTCTTGGCTTCACCAATTTCATGGCACGTATGGGAGCATCCATTTCTCCTCTTATTATGCTCCTAGAAGACATTTGGAAGCTCCTCCCTGAGGTTATTTTTTGCTCGATGGCTATTTTTTGTGGTATCATAGCATTGCTTCTTCCTGAAACCAACAATGCAAGTCTGCCAGAAACTGTAGAAGATATTGAGGACATGAGGTATAAGAAGTTCTCTCAAAGTACATTTTGTGATACAATAGAaagtatttttttgcttaacaatgaactaaaaacatatggtGTCATAaaaaatttatcataa

Function

symbol description
zmp:0000001102 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-140106-62 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000056652

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023822 True 1674 mRNA 0.45 10 22014345 22021213

Neighbor

gene id symbol gene type direction distance location
XLOC_012077 slc22a7b.1 coding downstream 3677 22002857 ~ 22010668 (-)
XLOC_012076 slc22a7b.2 coding downstream 12410 21994043 ~ 22001935 (-)
XLOC_012075 slc22a7b.3 coding downstream 20638 21982617 ~ 21993707 (-)
XLOC_012074 cuzd1.1 coding downstream 130022 21870044 ~ 21884323 (-)
XLOC_012073 NA coding downstream 150163 21863655 ~ 21864182 (-)
XLOC_012079 ttbk1b coding upstream 11083 22032296 ~ 22067451 (-)
XLOC_012080 mrps5 coding upstream 86489 22107702 ~ 22137199 (-)
XLOC_012081 CU104709.1 coding upstream 297867 22319080 ~ 22324727 (-)
XLOC_012082 NA coding upstream 463592 22484805 ~ 22504384 (-)
XLOC_012083 BX511218.1 coding upstream 500423 22521636 ~ 22525745 (-)
XLOC_012063 NA non-coding downstream 793866 21213422 ~ 21220479 (-)
XLOC_012061 AL929290.1 non-coding downstream 883968 21130261 ~ 21130377 (-)
XLOC_012055 NA non-coding downstream 1090817 20900590 ~ 20923528 (-)
XLOC_012054 BX927186.1 non-coding downstream 1311048 20703179 ~ 20703297 (-)
XLOC_012086 NA non-coding upstream 665957 22687170 ~ 22689787 (-)
XLOC_012087 BX548077.1 non-coding upstream 764961 22786174 ~ 22786291 (-)
XLOC_012088 BX511309.1 non-coding upstream 903996 22925209 ~ 22925337 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000312_00982855_00990039 NA coding CI01000312 null 982548 ~ 990039 (-)