Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_012097 |
| gene name | ifit14 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007128.7 |
| NCBI id | CM002901.2 |
| chromosome length | 53461100 |
| location | 23612616 ~ 23616626 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| ifit14 | Predicted to enable aminoacyltransferase activity. Acts upstream of or within defense response to virus. Predicted to be active in cytosol. Is expressed in gill; liver; muscle; and pleuroperitoneal region. Orthologous to several human genes including IFIT1 (interferon induced protein with tetratricopeptide repeats 1); IFIT1B (interferon induced protein with tetratricopeptide repeats 1B); and IFIT2 (interferon induced protein with tetratricopeptide repeats 2). |
| id | name | namespace |
|---|---|---|
| GO:0051607 | defense response to virus | biological_process |
| GO:0044038 | cell wall macromolecule biosynthetic process | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0016755 | transferase activity, transferring amino-acyl groups | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-131120-20 | Predicted to enable aminoacyltransferase activity. Acts upstream of or within defense response to virus. Predicted to be active in cytosol. Is expressed in gill; liver; muscle; and pleuroperitoneal region. Orthologous to several human genes including IFIT1 (interferon induced protein with tetratricopeptide repeats 1); IFIT1B (interferon induced protein with tetratricopeptide repeats 1B); and IFIT2 (interferon induced protein with tetratricopeptide repeats 2). |
| ensembl_id | ENSDARG00000071012 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00023849 | True | 1354 | mRNA | 0.44 | 2 | 23612616 | 23616626 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_012096 | ifit15 | coding | downstream | 3406 | 23607195 ~ 23609210 (-) |
| XLOC_012095 | ifit16 | coding | downstream | 9353 | 23598205 ~ 23603263 (-) |
| XLOC_012094 | htr7a | coding | downstream | 66900 | 23542115 ~ 23545716 (-) |
| XLOC_012093 | NA | coding | downstream | 127280 | 23483059 ~ 23485336 (-) |
| XLOC_012092 | pcgf5a | coding | downstream | 165856 | 23434211 ~ 23446760 (-) |
| XLOC_012098 | fas | coding | upstream | 3298 | 23619924 ~ 23631411 (-) |
| XLOC_012099 | NA | coding | upstream | 33908 | 23650534 ~ 23674495 (-) |
| XLOC_012100 | papss2a | coding | upstream | 64460 | 23681086 ~ 23709347 (-) |
| XLOC_012101 | minpp1a | coding | upstream | 94033 | 23710659 ~ 23727978 (-) |
| XLOC_012102 | pdzd8 | coding | upstream | 203824 | 23820450 ~ 23895026 (-) |
| XLOC_012088 | BX511309.1 | non-coding | downstream | 687279 | 22925209 ~ 22925337 (-) |
| XLOC_012087 | BX548077.1 | non-coding | downstream | 826325 | 22786174 ~ 22786291 (-) |
| XLOC_012086 | NA | non-coding | downstream | 922829 | 22687170 ~ 22689787 (-) |
| XLOC_012083 | BX511218.1 | non-coding | downstream | 1086871 | 22521636 ~ 22525745 (-) |
| XLOC_012103 | NA | non-coding | upstream | 369247 | 23985873 ~ 23987510 (-) |
| XLOC_012104 | NA | non-coding | upstream | 406681 | 24023307 ~ 24026857 (-) |
| XLOC_012105 | NA | non-coding | upstream | 587073 | 24203699 ~ 24219682 (-) |
| XLOC_012106 | NA | non-coding | upstream | 679724 | 24296350 ~ 24301689 (-) |
