CI01000299_05896205_05898855


Basic Information

Item Value
gene id CI01000299_05896205_05898855
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5896043 ~ 5898857 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_05896205_05898855.mRNA
AGATGAATCTTATCAGCCTGACTTTTCTTTCTCTGTTTCTCCCTGTTTTCTCTCTCCTGGTCTTTAAGGCAGTATTTCAGTCATCATGTAACTTCATCAGTCAGTCACTGTTAAACTTCTCCGTTTGTCTTCAGCAGGTTTTGTTTATAAATGTCGTCAGTCGGATGGGTGTGGGAGTGTTTGATGAAGATGGAGTGAAGACAGTGTCAGTGATGGAGGGAGATTCTCTCACTCTAGACACTCGTTTAAGAGAGAAATTTAGTCATATAAAGTGGAGGTTTGGAGGTTCAGGCTCAATCATTGCTGAAATTGATAGTAATGAGATCTCATATCCCTTCAATGACACTGAGAGTTTCAGAGACAGACTGAAGCTGAATAATCAGACTGGATCTCTGACCATCAAGAACATGAGAATCACAGACACTGGACTTTATCATCTAGAGATCGACCACGACACTTGGGAGCCATATAAGGAATTAAAAATTGTCGTCTGTAGATTTTATCCAGATCCAGTTCATACTCTAGGTTCTGTAACAGCAATAGTTGTTGTCGTTCTGCTGGTGTTATCTGGTGTTATCTATTGCTGTAAGATCTGTAAACGAGGAAGGCAAAACCGTGAGTATTACAGCTGAAACAGCAAGAGAAAAATAATGAGCTAAAAAATGAAGATTGTACAAGCTGACATTTATCTTCAAAAGCAAGTGAATGTGAACAACAGGCACTCCATGTGTCGCATGCGTCATCAAATAACTCCAAAATATATGTATAAAAATATAAATAATGTAAGATATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_05896205_05898855.mRNA False 794 mRNA 0.38 4 5896043 5898857

Neighbor

gene id symbol gene type direction distance location
CI01000299_05856747_05860959 NA coding downstream 33057 5856716 ~ 5862986 (-)
CI01000299_05849494_05852270 NA coding downstream 43537 5849402 ~ 5852506 (-)
CI01000299_05831615_05835696 NA coding downstream 60235 5831391 ~ 5835808 (-)
CI01000299_05826769_05831144 NA coding downstream 64731 5825966 ~ 5831312 (-)
CI01000299_05818562_05822413 NA coding downstream 72176 5818406 ~ 5823867 (-)
CI01000299_05919510_05924061 TXNL4B, TXNL4B.S coding upstream 20271 5919128 ~ 5924628 (-)
CI01000299_05927821_05933216 BLZF1 coding upstream 28457 5927314 ~ 5934832 (-)
CI01000299_05946615_05949088 NA coding upstream 47476 5946333 ~ 5949234 (-)
CI01000299_05974659_05985294 NA coding upstream 75534 5974391 ~ 5985606 (-)
CI01000299_06037407_06054548 TPP2 coding upstream 137360 6036217 ~ 6054548 (-)
G407848 NA non-coding downstream 120502 5774249 ~ 5775541 (-)
G407764 NA non-coding downstream 256177 5634840 ~ 5639866 (-)
G407734 NA non-coding downstream 341198 5552628 ~ 5554845 (-)
CI01000299_05457285_05462908 NA non-coding downstream 432871 5456864 ~ 5463491 (-)
G407669 NA non-coding downstream 477672 5413334 ~ 5418371 (-)
G407858 NA non-coding upstream 30782 5929639 ~ 5930546 (-)
G407827 NA non-coding upstream 46518 5945375 ~ 5946025 (-)
G407825 NA non-coding upstream 64823 5963680 ~ 5969556 (-)
G407881 NA non-coding upstream 119685 6018542 ~ 6023664 (-)
G407884 NA non-coding upstream 126168 6025025 ~ 6025802 (-)
G407805 NA other downstream 60054 5835889 ~ 5835989 (-)
CI01000299_05428160_05443433 APP, APPA other downstream 439935 5427661 ~ 5443433 (-)
CI01000299_04913779_04927715 NA other downstream 967225 4913373 ~ 4927715 (-)
G407413 NA other downstream 1345322 4475994 ~ 4550721 (-)
CI01000299_06526127_06532048 CEP97 other upstream 633144 6526127 ~ 6532048 (-)
CI01000299_05802706_05815472 MRPL16 coding downstream 6103 5802504 ~ 5815472 (-)
CI01000299_05739937_05770480 MRPL39 coding downstream 50768 5739808 ~ 5770807 (-)
CI01000299_05602070_05604608 NA coding downstream 216960 5601983 ~ 5604615 (-)
CI01000299_05512316_05521322 NA coding downstream 300253 5512051 ~ 5521322 (-)
CI01000299_05478688_05502027 ADAMTS5 coding downstream 318307 5477482 ~ 5503268 (-)
G405053 NA other downstream 3803525 2017687 ~ 2018050 (-)

Expression


Co-expression Network