G407477


Basic Information

Item Value
gene id G407477
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4678018 ~ 4678228 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU468184
TGTTCTAATCTGGTCTTTAATAATGTTCTCAAATCGTTAGCACAAAAACATCATTTATACATCATTCATGGGACTTTTTCTCCTGAAACGTTTTAGTTGGATGATGATCTAATATTTTTTAAATTTTTAAATGTAACTACTTGTTTTAGAATGTTTAGAGAACATTCAAAAGTAACAATAAAATGGAATGTTCATATATAAGAAAAAACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU468184 True 211 lncRNA 0.26 1 4678018 4678228

Neighbor

gene id symbol gene type direction distance location
CI01000299_04658984_04668843 ATP1A1A.4, ATP1A1 coding downstream 8996 4658895 ~ 4669022 (-)
CI01000299_04645836_04651938 ATP1A1A.4, ATP1A1B, ATP1A1, ATP1A1A.1 coding downstream 26080 4645639 ~ 4651938 (-)
CI01000299_04603421_04609353 ATP1A1A.4, ATP1A1A.2, ATP1A1A.3, ATP1A1 coding downstream 68665 4603391 ~ 4609353 (-)
CI01000299_04587880_04594059 ATP1A1A.4, ATP1A1A.5, ATP1A1A.3, ATP1A1 coding downstream 83898 4587794 ~ 4594120 (-)
CI01000299_04456420_04468754 NA coding downstream 208568 4456229 ~ 4469450 (-)
CI01000299_04708767_04714088 RCAN1B coding upstream 30275 4708503 ~ 4714088 (-)
CI01000299_04741460_04746667 NA coding upstream 63219 4741447 ~ 4746667 (-)
CI01000299_04861862_04862244 NA coding upstream 183349 4861577 ~ 4862593 (-)
CI01000299_04913779_04927715 NA coding upstream 235145 4913373 ~ 4927715 (-)
CI01000299_05379545_05381902 NA coding upstream 700921 5379149 ~ 5382140 (-)
G407476 NA non-coding downstream 572 4677110 ~ 4677446 (-)
G407467 NA non-coding downstream 40593 4636610 ~ 4637425 (-)
G407420 NA non-coding downstream 91970 4571131 ~ 4586048 (-)
G407422 NA non-coding downstream 114354 4504710 ~ 4563664 (-)
G407475 NA non-coding upstream 25896 4704124 ~ 4704801 (-)
G407526 NA non-coding upstream 143813 4822041 ~ 4823551 (-)
G407562 NA non-coding upstream 261463 4939691 ~ 4939939 (-)
G407564 NA non-coding upstream 277870 4956098 ~ 4956365 (-)
G407565 NA non-coding upstream 279759 4957987 ~ 4996909 (-)
G407413 NA other downstream 127297 4475994 ~ 4550721 (-)
G405053 NA other downstream 2659968 2017687 ~ 2018050 (-)
G404976 NA other downstream 2797030 1855639 ~ 1880988 (-)
G404784 NA other downstream 3018018 1659655 ~ 1660000 (-)
CI01000299_05428160_05443433 APP, APPA other upstream 763109 5427661 ~ 5443433 (-)
G407805 NA other upstream 1149608 5835889 ~ 5835989 (-)
CI01000299_06526127_06532048 CEP97 other upstream 1853773 6526127 ~ 6532048 (-)

Expression


Co-expression Network