CI01000299_04741460_04746667


Basic Information

Item Value
gene id CI01000299_04741460_04746667
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4741447 ~ 4746667 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_04741460_04746667.mRNA
TTTCACTGTCGTCAAGCCTACAGACTCAGAGATGGCGCTGGACCAAGATCCAAGGAGAACTGGCACAGATGAAATAAACACAGCAAGAGCAAAGCTACTGAGGACCGGACCAATGACGACATTTCCCGACGGAGATGGAAAGACTGTAGTGATGAGAGCTTTAGACGAAATAATTACAGCGACAAGTAGCCCAAATGTCAGAGACAAAACAGGTATCAATAATCTATTAAAGACACTAACACTCCTTTCTGACGGACACGAGGAGATTGATGGATCTCTGAGGACAGACCGCACAACCAGTTCCCCTGATTCCCAGCGGCAAACGGAGAAGAACAGACTGTTCAGGCTGTCAGAGGTGATTGGGTCAAACGAGCACGACGACACTCCAACAGCAGCCAAACAATCCAAGCCTGATCCTGTCACGGGTGATCCTGAGGCTCGAGAGGAGCTGGTGAAGATGTTGAGTGCACTTGAAGAGCTTCACAAGTTAATGAACCGCACACTGAGGCATCGAATCACCATCATACCCAGAGGAAATAGCAATGGGCGAGGTACTGGGAAAAAGAACAAAATGGTAGTGACAGATGGAAACCTGAAATCCACCACAGCGACCACTATAGACAGCGGTGGAATTTCACCGAAGGCCAGCACTGACCAGATGGATCCCAAACTCAATGGAAAAGCCTTTAAAAAGTCTGTTCCATCAGCTAAGAAACCCAACAAAAGAGATACAAAGACAAAAAAAAACACCAATACATTAACTACTGCTTATCTTTCTCCAAAAAAACAGTGTGCTTCTGGAAGTACTGCTCTCAGAACTGAGCTTCGCCTAGATGAGCGACAGATTTCACCCTCATTTCACCAACCTTTGAAATGCCAAGCAACAAATCCTGTTCTCAAACATAGATGCTTAAACTCTTCTCAATGGACCATCAATAACATGACTGACCGCTCTGACCCCTGTGACGTGTGTACCCTTGATTTTGTGCACGAAATCCTGTTAACCTTCTATCAACAACACCAATAAAAATTCCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_04741460_04746667.mRNA True 1040 mRNA 0.45 5 4741447 4746667

Neighbor

gene id symbol gene type direction distance location
CI01000299_04708767_04714088 RCAN1B coding downstream 27359 4708503 ~ 4714088 (-)
CI01000299_04658984_04668843 ATP1A1A.4, ATP1A1 coding downstream 72425 4658895 ~ 4669022 (-)
CI01000299_04645836_04651938 ATP1A1A.4, ATP1A1B, ATP1A1, ATP1A1A.1 coding downstream 89509 4645639 ~ 4651938 (-)
CI01000299_04603421_04609353 ATP1A1A.4, ATP1A1A.2, ATP1A1A.3, ATP1A1 coding downstream 132094 4603391 ~ 4609353 (-)
CI01000299_04587880_04594059 ATP1A1A.4, ATP1A1A.5, ATP1A1A.3, ATP1A1 coding downstream 147327 4587794 ~ 4594120 (-)
CI01000299_04861862_04862244 NA coding upstream 114910 4861577 ~ 4862593 (-)
CI01000299_04913779_04927715 NA coding upstream 166706 4913373 ~ 4927715 (-)
CI01000299_05379545_05381902 NA coding upstream 632482 5379149 ~ 5382140 (-)
CI01000299_05419449_05423414 ATP5J coding upstream 672736 5419403 ~ 5423414 (-)
CI01000299_05428160_05443433 APP, APPA coding upstream 680994 5427661 ~ 5443433 (-)
G407475 NA non-coding downstream 36646 4704124 ~ 4704801 (-)
G407477 NA non-coding downstream 63219 4678018 ~ 4678228 (-)
G407476 NA non-coding downstream 64001 4677110 ~ 4677446 (-)
G407467 NA non-coding downstream 104022 4636610 ~ 4637425 (-)
G407420 NA non-coding downstream 155399 4571131 ~ 4586048 (-)
G407526 NA non-coding upstream 75374 4822041 ~ 4823551 (-)
G407562 NA non-coding upstream 193024 4939691 ~ 4939939 (-)
G407564 NA non-coding upstream 209431 4956098 ~ 4956365 (-)
G407565 NA non-coding upstream 211320 4957987 ~ 4996909 (-)
G407591 NA non-coding upstream 338727 5085394 ~ 5182362 (-)
G407413 NA other downstream 190726 4475994 ~ 4550721 (-)
G405053 NA other downstream 2723397 2017687 ~ 2018050 (-)
G404976 NA other downstream 2860459 1855639 ~ 1880988 (-)
G404784 NA other downstream 3081447 1659655 ~ 1660000 (-)
G407805 NA other upstream 1081169 5835889 ~ 5835989 (-)
CI01000299_06526127_06532048 CEP97 other upstream 1785334 6526127 ~ 6532048 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000033 urp2 coding NC_007112.7 CM002885.2 1599979 ~ 1614500 (+)