G407805


Basic Information

Item Value
gene id G407805
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5835889 ~ 5835989 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU468584
CATCATCATCATCAGTATCATTGCTGCAGTAGATGCGACCAGAAGCAACACCAATATGAGGAACAATACTTTGCTTTTTTGGGTTCTATTACTCGTGGACGGTGTGTTTGGTTCTGATAAAGTGATATCAGTGTCAGTGATGGAGGGAGATTCTGTCACTCTACGCATCGATCTCGCTGAAATAAAGGGAGTTAGTAAGATAATATGGAAATATGGTGTTGATGTCATAGCTAAAATTCAAGATGGAACCCCTTCTTTTCCCCATTCTGATGAGAGATTCACAGACAGACTGAAGCTGGACGAACAGACGGGATCACTGACCATCACAAACATCAGAACTGAACATGCAGGAGACTATAGTGTAGACATCAAGACTACAATTGCAAATCTGACTAAATTCAAAGTTACTGTCCATGATAATGTGGAGTCAGTGCCAGTGATGCAGGGAGATTCTGTCAGTCTACACACTGGTGTTACTGATATACAGAGAGATGATCAGATACTGTGGAAGTTTGGAGATCAGGTCATCCTCACTGATGGCTTAAACACCGCTGTTGATGAAAGATGGAGGAACATTGATCTAAATGCTCAAACCCGAGAAATCACCATCAGAAACATCAGAATCGATCAGTCTGGATATTATAAAATGGAGTTCAACAGCATCAGAATGATCTTACACAAGAAATTCAGTGTTACTGTTGGTGGTGTGTTTAGTAATGAGAAAGATGGAGTGAAGACGGTGTCAGAGAAGAAGGGAAATGATGTACTTCTACACACTCGCGTGACTGAAATAGAAAAAGATGATCCGATAGAGTGGACATTTGGACCTCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU468584 True 101 TUCP 0.41 1 5835889 5835989

Neighbor

gene id symbol gene type direction distance location
CI01000299_05818562_05822413 NA coding downstream 3969 5818406 ~ 5823867 (-)
CI01000299_05802706_05815472 MRPL16 coding downstream 12364 5802504 ~ 5815472 (-)
CI01000299_05739937_05770480 MRPL39 coding downstream 57029 5739808 ~ 5770807 (-)
CI01000299_05602070_05604608 NA coding downstream 223221 5601983 ~ 5604615 (-)
CI01000299_05512316_05521322 NA coding downstream 306514 5512051 ~ 5521322 (-)
CI01000299_05849494_05852270 NA coding upstream 13413 5849402 ~ 5852506 (-)
CI01000299_05856747_05860959 NA coding upstream 20727 5856716 ~ 5862986 (-)
CI01000299_05896205_05898855 NA coding upstream 60054 5896043 ~ 5898857 (-)
CI01000299_05919510_05924061 TXNL4B, TXNL4B.S coding upstream 83139 5919128 ~ 5924628 (-)
CI01000299_05927821_05933216 BLZF1 coding upstream 91325 5927314 ~ 5934832 (-)
G407848 NA non-coding downstream 52295 5774249 ~ 5775541 (-)
G407764 NA non-coding downstream 187970 5634840 ~ 5639866 (-)
G407734 NA non-coding downstream 272991 5552628 ~ 5554845 (-)
CI01000299_05457285_05462908 NA non-coding downstream 364664 5456864 ~ 5463491 (-)
G407669 NA non-coding downstream 409465 5413334 ~ 5418371 (-)
G407858 NA non-coding upstream 93650 5929639 ~ 5930546 (-)
G407827 NA non-coding upstream 109386 5945375 ~ 5946025 (-)
G407825 NA non-coding upstream 127691 5963680 ~ 5969556 (-)
G407881 NA non-coding upstream 182553 6018542 ~ 6023664 (-)
G407884 NA non-coding upstream 189036 6025025 ~ 6025802 (-)
CI01000299_05428160_05443433 APP, APPA other downstream 371728 5427661 ~ 5443433 (-)
CI01000299_04913779_04927715 NA other downstream 899018 4913373 ~ 4927715 (-)
G407413 NA other downstream 1277115 4475994 ~ 4550721 (-)
G405053 NA other downstream 3809786 2017687 ~ 2018050 (-)
CI01000299_06526127_06532048 CEP97 other upstream 696012 6526127 ~ 6532048 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_020180 si:dkey-182g1.10 coding NC_007133.7 CM002906.2 8772363 ~ 8809496 (+)