CI01000300_10370185_10373703 (FGG)


Basic Information

Item Value
gene id CI01000300_10370185_10373703
gene name FGG
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 10369923 ~ 10373742 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_10370185_10373703.mRNA
ACAATCTCAAGGGTACACCACACAGATTGCAGGTCCAACATGGCCTCGTTCATGCATGTGGTTTCTTCCATCCTGCTGCTCTCCACATTAACATCAGCGCAAATGAGAGGGGACTATTCACCGTCGCAAGATATATGTAACCCAAACGATGGGTTTGGGATATACTGCCCTACCACATGTGGAGTTGCTGATTACCTACAGAGGTACCAGCCTGAAATGGACAGACAGCTGAATGAAATGGAACAGGATTTGCAGGAGATCGCCAACCTTACCAGAGGAGCACAGGACAAAGTGGTCTACCTGAGAGACTCAGAAACACAAGCACAAAAACAAGCACCAGATACATACATCAAAAAATCTTCAAGCATGCTGGATGATATACTGCGATTTGAGAAGAGCATTCTCGCTCAGGAAGATCAAATATATCAACTGCAGTCAATCCTACAGGCTAACGAGAAACGAATAACTGATTTAAAGCAGATGTCTCTCCAGCTGGACCAGTTGTGCAAAGAGCCCTGCAAAGACACTGTGGAGATTCAGACATTCACAGGCAAAGATTGTCAGGACATTGCAAACAAAGGTGGTAAGGTCAGTGGGCTCTACTATGTAAAACCAGCCAGGGCTCCTGAGGCGTTCCTGGTCTACTGTGAGATAGACAGCTTTGGACGTGGATGGACTGTACTTCAGAGGAGACGGGATGGCAGCGTTGACTTCAACAAACAGTGGATTCAGTATAAGGAAGGCTTTGGGTACCTCTCACCAGATGACAGAACAGAGTTCTGGCTAGGAAATGAGAAGATACATCTGCTGTCGGTTCAGTCCAGCGTGCCTTATGTGCTAAGGATAGAGATGGTCGATTGGGACGGCAACAAAAAGTATGCCGACTACGCCACTTTCAAACTTGGACCAGAAATTGATGCCTACCGCTTGACGTACGCTTATTTCTTTGGTGGAGATGCTGGTGATGCCTTTGATGGTTATGACTTTGGCGACGATCCCAGTGACAAATTCTACACATCTCACAATGGCATGCAGTTCAGTACACCTGACAAAGACAACGACAAGTTCGTGGAACACTGTGCCTTGCAGGAAGGGTCCGGCTGGTGGATGAACCGCTGCCATGCTGCTCATCTCAATGGAAAATACTATCAAGGTGGCAAGTACACAGAGAAGGACACACAGCATGGATATGACAACGGTATCATCTGGGCCACGTGGCACAGTCGCTGGTATTCTCTGAAGGAGACCACCATGAAGATCATTCCCATCAACAGAATCGCTACTGGAGGGCAGGAAAGCGGTGCCAAGCAATTTGGAGGCCTGGGAGACATTTAAAGACCTTACCAAAGCTCTCCCCATTGTTCTGAGCTTTCATTTTATTTTTGTGTAACAATTGTTGAAATACATGGAAATGACATTGGCCAGGCATTTTCAAGTTAGGGTAAACATGTCTATTGGTGTCTGATATTTTCTATTATTCAAAAATTAGGTCTGCAAAAGCTTCATACACAAGTCATGTTGGTCATGTTTTTAAATTTGAACAACTCATTTAAAATGTAATGGCCTAATGCATCGCATGTGTCAATGAATTAATAAA

Function

symbol description
fgg Predicted to enable signaling receptor binding activity. Acts upstream of or within blood coagulation, fibrin clot formation. Predicted to be located in extracellular region. Predicted to be part of fibrinogen complex. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in liver and yolk syncytial layer. Human ortholog(s) of this gene implicated in congenital afibrinogenemia and multiple myeloma. Orthologous to human FGG (fibrinogen gamma chain).

NR:

description
Fgg protein

GO:

id name namespace
GO:0051258 protein polymerization biological_process

KEGG:

id description
K03905 FGG; fibrinogen gamma chain

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_10370185_10373703.mRNA True 1597 mRNA 0.45 9 10369923 10373742

Neighbor

gene id symbol gene type direction distance location
CI01000300_10313545_10352632 DCHS2 coding downstream 16407 10313282 ~ 10353516 (-)
CI01000300_10273821_10275599 SFRP2 coding downstream 92428 10273449 ~ 10277495 (-)
CI01000300_10252331_10267292 ARFIP1 coding downstream 102224 10252331 ~ 10267699 (-)
CI01000300_10221037_10234396 FHDC1 coding downstream 135527 10220518 ~ 10234396 (-)
CI01000300_10176172_10189470 TRIM2, TRIM2A coding downstream 180034 10175937 ~ 10189889 (-)
CI01000300_10408955_10421392 NA coding upstream 35077 10408819 ~ 10421392 (-)
CI01000300_10501568_10527998 USP53B coding upstream 127296 10501038 ~ 10529291 (-)
CI01000300_10534320_10539931 MYOZ2, MYOZ2B coding upstream 159652 10533394 ~ 10539987 (-)
CI01000300_10550389_10552830 NA coding upstream 176309 10550051 ~ 10555244 (-)
CI01000300_10591932_10594068 NA coding upstream 216642 10590384 ~ 10594068 (-)
G414730 NA non-coding downstream 27234 10342467 ~ 10342689 (-)
G414723 NA non-coding downstream 75493 10294185 ~ 10294430 (-)
G414722 NA non-coding downstream 77425 10292159 ~ 10292498 (-)
G414719 NA non-coding downstream 80360 10289099 ~ 10289563 (-)
G414587 NA non-coding downstream 194775 10170685 ~ 10175148 (-)
G414738 NA non-coding upstream 8109 10381851 ~ 10382206 (-)
G414757 NA non-coding upstream 33618 10407360 ~ 10407713 (-)
G414758 NA non-coding upstream 54952 10428694 ~ 10429137 (-)
G414759 NA non-coding upstream 56054 10429796 ~ 10430161 (-)
G414764 NA non-coding upstream 76914 10450656 ~ 10452540 (-)
G414498 NA other downstream 709118 9658049 ~ 9713722 (-)
CI01000300_08959695_08973598 UGDH, UGDH.L other downstream 1393923 8958963 ~ 8973750 (-)
G413140 NA other downstream 2223034 8146532 ~ 8146889 (-)
G412681 NA other downstream 3679590 6652998 ~ 6690333 (-)
G412555 NA other downstream 4154344 6214920 ~ 6215579 (-)
CI01000300_10698449_10700497 NA other upstream 322269 10696011 ~ 10701375 (-)
G414829 NA other upstream 332258 10706000 ~ 10706323 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location