CI01000304_10316482_10319012


Basic Information

Item Value
gene id CI01000304_10316482_10319012
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10316308 ~ 10319017 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_10316482_10319012.mRNA
CTTTTAAGAGAGGGGCCATTAACGCCAGTCCTCCGCTACACCAGCTCGAATGGCCCGCCACATGAAGGAACGGCCACGGGCGGGAGAGGATAGGCTGTAACAATGCATCTGAGGCAAATGCATCATTACTTACCCTAGCGGATTTGTAAACAGAAAACCGGCCCCAGACCGACCATGGTCCCCTTATTCGAACCTCTATTCATTACAAGCAGAACGTCGGTGCTGCTCGCCTTTCAGTGGTGTACGAGCGGCCCAGGAAATCTGGACGCCCATCGCTGGGTCGAGATCCAAGGTGCTCCGAGCTCTGTCACAGGCCAACTCATTCTGCTGATATATGACTGGCTCAAAAACAACCTTCAAGCTCTCAGGAAACCTGCCTGTTTTCAGAGTAAGAGATCAGATGGAGGACGAAGTGGTAACTTCGAGATTGATAGAAGCCAGACAGGCACAAGACTCTACCGAATGAGAAAGTGTCAGTCAGCCAGTTTATTGTGGCAGACACGGTTCTCACATGGCTGTGCTGTCAAGCATCTAAAGTCTAAACCTCAGGGACTGGGCCCTAAATTCACAGCCCATATGGTGTGAACGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_10316482_10319012.mRNA True 590 mRNA 0.51 4 10316308 10319017

Neighbor

gene id symbol gene type direction distance location
CI01000304_10292429_10311478 LTN1 coding upstream 4580 10292429 ~ 10311728 (+)
CI01000304_10276598_10283032 SLC25A1, SLC25A1-B, SLC25A1A coding upstream 32558 10276598 ~ 10283750 (+)
CI01000304_10256417_10260924 NA coding upstream 55384 10256223 ~ 10260924 (+)
CI01000304_10192819_10195110 CLG07H17ORF49, CSSA04H17ORF49 coding upstream 121198 10190564 ~ 10195110 (+)
CI01000304_10189588_10190707 MED11 coding upstream 125331 10189588 ~ 10191798 (+)
CI01000304_10327313_10328936 NA coding downstream 8244 10327261 ~ 10329392 (+)
CI01000304_10451536_10470518 CD209 coding downstream 131393 10450410 ~ 10471255 (+)
CI01000304_10473174_10473651 NA coding downstream 153075 10472092 ~ 10473725 (+)
CI01000304_10489464_10500854 NA coding downstream 170364 10489381 ~ 10501137 (+)
CI01000304_10504058_10505899 NA coding downstream 183971 10502988 ~ 10506016 (+)
G424376 NA non-coding upstream 63036 10253047 ~ 10253272 (+)
G424366 NA non-coding upstream 73095 10242979 ~ 10243213 (+)
G424351 NA non-coding upstream 95193 10219120 ~ 10221115 (+)
G424248 NA non-coding upstream 99453 10153444 ~ 10216855 (+)
G424337 NA non-coding upstream 162904 10153184 ~ 10153404 (+)
CI01000304_10528999_10530630 NA non-coding downstream 204244 10525290 ~ 10530847 (+)
G424547 NA non-coding downstream 213229 10532246 ~ 10543770 (+)
G424790 NA non-coding downstream 518168 10837185 ~ 10837475 (+)
G424794 NA non-coding downstream 531293 10850310 ~ 10850575 (+)
G424251 NA other upstream 123413 10188822 ~ 10189404 (+)
G424246 NA other upstream 188986 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 750735 9561005 ~ 9565778 (+)
G423614 NA other upstream 1366886 8949036 ~ 8949422 (+)
CI01000304_08671901_08672203 NA other upstream 1643753 8671770 ~ 8672555 (+)
CI01000304_10555326_10571933 NA other downstream 236269 10555216 ~ 10572164 (+)
G425718 NA other downstream 2109688 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 3237434 13578049 ~ 13595097 (+)
G426312 NA other downstream 4011031 14330048 ~ 14330886 (+)
G426828 NA other downstream 4629873 14948890 ~ 14950592 (+)

Expression


Co-expression Network