CI01000304_12424217_12429262


Basic Information

Item Value
gene id CI01000304_12424217_12429262
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 12423206 ~ 12430351 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_12424217_12429262.mRNA
CTATAAAAATGCCAAAGATAAAGTTGACTAGTTGACCCCAGAAAGCCATTCTGCCATTGTTATTTCATTCACCCATCCAAAAGCAGCATTAATTATGTAGTTTGAACTTCCTGTTTGACAGCCACAGAGAAGTCACAAATCCTGTTACATAAAAAAGATGAAGCAAGTCATTGTTTTTTAAATTGGACTGTCGGATATGAGCACTATAAATATTTAAAACTTTTAAACTAGATCTGTCCAGTTTTATATGTTCAGCACAAGATACTGACATAGCCTACAAAAATTCACGTAGTTTCTGTTGGGAAACTTATGTTGGCTTATTCACCATGAATCACTAAAGAAGAACAAGTTTCAAGGAAAACAAACTATAAAAGTTATACAGACTATGTTTTTTCACTTAAGAGTTTATGTCATAAAAGGTGTAGTTTTTCCCCAAATAGCACATCTCAACACTTAGCACATAATGTCTGTGTTTGTTGTTTCTTAACTGTTATTTCAATAGCATTAGCTAGTAGTTTAACAGCCATGGACGTCAATTATGAGGGCAGTATTAGTCAGCCAAGTCTTGTCAATATTTGCTGGGTCCCAAGTCTGAACCGAGTTCTCTGACTCAGCAGAAAAGTATAAAAGACAGAAATGACTCAGGCATGTGAATGGGTATCCATACAAATATAATCATCTAAAGGGATTATATAATCCACATATTATATATTCATACTTTTATGTTAGGAAGTCTGAAGTGTGACAAAATGCATTATTCAAACATTGGGACGTTTTCTCATGACACTACAAACTGCTTTACAGGTATAAATGGTAAAATGCAGGGAAAATGACCCACAAACACTGCAGGTGCAGGCTGAAAAAAGAAAAGGAAAAAAGAAAAAACACCCACCGGATGAGATATCTGTTTGCATAAAGTGCAAACAGCTATGTCCTGAACTTTAGAGCAGATCATGAATGTATTTAGATTTGGGAAAGATTTCTGCCTGAAGGGAAATCATCATAGAGAAAATGGTGAAGATTTATCCCATTATTTGGGCATGCACTTTGCTGCTTGAAACCTGGCTAACATCTGAAGCTTCAGTGTTTCTGCCGAGGGATCTGGCGGGGTCTCTTCTGAAGAGACAAAAACGCTTTAACTCAGGTAGGTTTGAGGAGTTGAAGACGGCTAACTTGGAAAGGGAATGTATCGAAGAGCGCTGCAATCTAGAGGAGGCCAGAGAGTTCTTTGAAGACCATGAGCAAACCATGAAATTCTGGGCCACTTATAAGGATGGAGACCAGTGTCAGTCGTCTCCCTGTCAGAATAGTGGAATATGTGTGGGTGGTATGAATACATATACCTGCTGGTGTCCAGCCCGCTTTAGTGGGAAGAACTGTGAGTTAGGGGAACATGATATCTCAAAGGAGGAGGGAAAAGAGAGTGAACACACTGTAGCGGAGTGGCATATCCATCCAAATTACAACTCTCAACAGAGTGTTTACAATCATGACATCGCCCTGTTGAAGCTCAAGGGACCCGTCAAATTCTCAGACTACGCCCTGCCCATCTGCCTGGGCTCTAAAGACTTCACAGAGAACCTGCTCAAGAACGCGCAAAACTCCCAGGTGAGTGGCTGGGGAAGGCTACTGCACGGGGGCGTCGAATCCAAAACACTTCAGAAAGTAGAGCTCCCCTACGTGGACCGGACAGAGTGCAAAGGCAGCAGCACCTACGCCATCACCCGCTTCATGTTCTGTGCCGGTTACAGTACGGTACGCAAGGATTCCTGTCAGGGAGACAGTGGAGGACCCCATGCCACCCTCTTTCAGAACACATGGTTCCTCACGGGCATCGTCAGCTGGGGTGAAGAGTGCGCCAAAGAGGGAAAGTATGGCATCTACACCCGCATCTCAAAATATATGAACTGGATAAGTAACATTACTGGGATCAGAACAGGATAAATGTCCAATAGTGGTCGATAGAGTTTGAATTCCAGATTTGTTTTGAAGAAAAATACATGTTGGAATGAATTAGAGCTCACAGACATTTCTGTACAGATGATATTTACTAGTCATCATTCAACAAACATCCTGTAACAATCAAGAAA

Function

NR:

description
F9 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_12424217_12429262.mRNA False 2090 mRNA 0.41 5 12423206 12429408

Neighbor

gene id symbol gene type direction distance location
CI01000304_12394477_12400175 TMTOPS3B coding upstream 22891 12393500 ~ 12400315 (+)
CI01000304_12385473_12389970 NA coding upstream 32679 12385473 ~ 12390527 (+)
CI01000304_12375591_12385064 HTATSF1 coding upstream 38086 12375591 ~ 12385120 (+)
CI01000304_12362738_12374610 NA coding upstream 48596 12362738 ~ 12374610 (+)
CI01000304_12353305_12359214 FHL1B coding upstream 63368 12353006 ~ 12359838 (+)
CI01000304_12437868_12439019 NA coding downstream 8250 12434972 ~ 12439086 (+)
CI01000304_12468041_12473615 ARR3A coding downstream 38633 12468041 ~ 12473708 (+)
CI01000304_12478136_12484791 NA coding downstream 48728 12478136 ~ 12484978 (+)
CI01000304_12485748_12487703 SSSCA1 coding downstream 56340 12485748 ~ 12487763 (+)
CI01000304_12489630_12490940 FAM89B coding downstream 60174 12489582 ~ 12491500 (+)
G425764 NA non-coding upstream 120480 12302340 ~ 12302726 (+)
G425765 NA non-coding upstream 122584 12300413 ~ 12300622 (+)
G425666 NA non-coding upstream 166012 12255099 ~ 12257194 (+)
G425660 NA non-coding upstream 249147 12172882 ~ 12174059 (+)
G425635 NA non-coding upstream 306840 12111311 ~ 12116366 (+)
G425777 NA non-coding downstream 25773 12455181 ~ 12455395 (+)
G425778 NA non-coding downstream 26085 12455493 ~ 12455853 (+)
G425796 NA non-coding downstream 131666 12561074 ~ 12561425 (+)
CI01000304_12583384_12588591 WDR74 non-coding downstream 159513 12583384 ~ 12589788 (+)
G425812 NA non-coding downstream 161848 12591256 ~ 12593865 (+)
CI01000304_10555326_10571933 NA other upstream 1867502 10555216 ~ 10572164 (+)
G424251 NA other upstream 2230311 10188822 ~ 10189404 (+)
G424246 NA other upstream 2295884 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 2857633 9561005 ~ 9565778 (+)
G423614 NA other upstream 3473784 8949036 ~ 8949422 (+)
CI01000304_13578347_13595075 NA other downstream 1127043 13578049 ~ 13595097 (+)
G426312 NA other downstream 1900640 14330048 ~ 14330886 (+)
G426828 NA other downstream 2519482 14948890 ~ 14950592 (+)
G427860 NA other downstream 3456046 15885454 ~ 15889591 (+)
G428017 NA other downstream 3653822 16083230 ~ 16083714 (+)

Expression


Co-expression Network