Gene
RNA
| Item | Value |
|---|---|
| gene id | G423379 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 8241860 ~ 8242079 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU486224 | True | 220 | lncRNA | 0.40 | 1 | 8241860 | 8242079 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_08218405_08218927 | NA | coding | downstream | 22933 | 8217634 ~ 8218927 (-) |
| CI01000304_08165245_08217042 | NA | coding | downstream | 24818 | 8165197 ~ 8217042 (-) |
| CI01000304_07961608_07968820 | NA | coding | downstream | 272911 | 7961565 ~ 7968949 (-) |
| CI01000304_07612069_07709665 | NA | coding | downstream | 532195 | 7612069 ~ 7709665 (-) |
| CI01000304_07464639_07466430 | NA | coding | downstream | 775430 | 7464235 ~ 7466430 (-) |
| CI01000304_08329095_08386362 | GFRA2B, GFRA2 | coding | upstream | 87016 | 8329095 ~ 8386362 (-) |
| CI01000304_08510508_08532975 | NA | coding | upstream | 268391 | 8510470 ~ 8533026 (-) |
| CI01000304_08567281_08570808 | PBDC1 | coding | upstream | 325115 | 8567194 ~ 8570808 (-) |
| CI01000304_08605819_08615439 | HTR7B | coding | upstream | 362796 | 8604875 ~ 8617967 (-) |
| CI01000304_08680653_08681838 | NA | coding | upstream | 438052 | 8680131 ~ 8682389 (-) |
| G423375 | NA | non-coding | downstream | 4730 | 8236882 ~ 8237130 (-) |
| G423369 | NA | non-coding | downstream | 6569 | 8231994 ~ 8235291 (-) |
| G423337 | NA | non-coding | downstream | 21686 | 8219608 ~ 8220174 (-) |
| G423368 | NA | non-coding | downstream | 49853 | 8190502 ~ 8192007 (-) |
| G423367 | NA | non-coding | downstream | 84163 | 8157485 ~ 8157697 (-) |
| G423448 | NA | non-coding | upstream | 62105 | 8304184 ~ 8304715 (-) |
| G423454 | NA | non-coding | upstream | 75822 | 8317901 ~ 8322796 (-) |
| G423472 | NA | non-coding | upstream | 147740 | 8389819 ~ 8390034 (-) |
| G423474 | NA | non-coding | upstream | 148457 | 8390536 ~ 8390762 (-) |
| G423496 | NA | non-coding | upstream | 184744 | 8426823 ~ 8427031 (-) |
| G422810 | NA | other | downstream | 589157 | 7630159 ~ 7652703 (-) |
| G422378 | NA | other | downstream | 1458814 | 6744679 ~ 6783046 (-) |
| G422354 | NA | other | downstream | 1610361 | 6631086 ~ 6631499 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | downstream | 1758365 | 6480743 ~ 6483986 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | downstream | 3568913 | 4661766 ~ 4672947 (-) |
| G423386 | NA | other | upstream | 620144 | 8862223 ~ 8865296 (-) |
| CI01000304_09566730_09575706 | NA | other | upstream | 1326277 | 9566730 ~ 9575706 (-) |
| CI01000304_09737662_09738777 | NA | other | upstream | 1494667 | 9736746 ~ 9738777 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | upstream | 1911367 | 10160458 ~ 10163762 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | upstream | 1948495 | 10190574 ~ 10192357 (-) |
