CI01000304_07961608_07968820


Basic Information

Item Value
gene id CI01000304_07961608_07968820
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7961565 ~ 7968949 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_07961608_07968820.mRNA
AAAAGACATACCTGAGAAAATTAAATATCACTCAAATGTCCTCAAGTGTGACTGCTATGGCTACTGAAGCATATTGGTGTTGAAACTACAAACATGTTAAAAGTCATGGATGGTTATCATCTGCACAACATGACCAACATGTATGCAGAAGATAACATAAATTCAACCATTTTTCCTGAGAACTCTACCAGCTGCACCGTGACACCTGCGTTTGACATAGATGTGACTAAGACACTGGCTTTGGGCCTGGTGCTGATGCTCTTCCTAATATTTGGTGTGATGGGTAACATCCTGGTCATCCTCTCCGTGGCCTGCCATCACAACTTTCATTCCGTGACGCATTATTTTATCGCCAATCTGGCTGTTGCAGACCTGCTTCTGAGCTCTGTGGTGGTCCCGTTGTCCGCTGCATCAGAAGCCTTGGGCTGCTGGGTATTCGGTCGTCATTTATGTAATGCCTGGACTGCGCTTGACGTGCTGTGCTGCACGGCATCCATCCTCAGCCTCTGCGTGATCTCTGTGGATCGCTGGATCGCCGTCAGTTACCCGCTGCAGTACCCTTCCTTAGCTACAAGCCGAAGGGCAGTGGCGGCAGTGGTGGCTCTCTGGGCCCTTTCAGGTGCCATCTCAGTAGGCCCACTGTTAGGATGGAGGGATCCAATGCCGGAGGATGAGTCCGTGTGCAGAGTTAATGAAGAGCCGGGGTACACCATCTTCTCCGCCGCATGCTCTTTCTACGTGCCGTTGGCGGTGATTTTGGCAATGTACTTTAGCGTGTACATAGTGGCCCGGCAGAAGACTTGTTCCATGAGTCAGAGCAGGCAGAAGAATGAGTTAACTGAGAACGGAGTGACACTGCGGATTCACTGTCATAACGCCCAGAATGCTGCCGGGAAGGAGAATGCCACCCGCTTGAAGCACTCGCCCTTCGCCTTCATTATTAAGTTCTTCCAGGAGAAGAAGGCAGCTAAGACTCTGGGTATTGTGGTGGGCTGTTTCGTGCTCTGCTGGCTGCCTTTTTTCATAGTGTTGCCCATGAGATCTATTTTCCCATCTCACAGACCCCCGGACACTGTCTTCAAAATTACTTTCTGGCTGGGCTACTTCAACAGCTGCCTCAACCCCATCATCTACCCGTGCTTTAGCCAGGAGTACAAGAAGGCCTTCCAGAACGTTCTCCATGGCCGCTGCCTCAGCAGAACGCACAGGACTTGGAGCCCTCCGGCCTCTGGTCAAGACCCTATGACTCTGCATGGACCCAAATCTCCACAGGGTTTACCATCTGGATTTACAGACTCCTGTACGGATAGTAATGCATCGCCTACTGCTGTAATAGATGAGTGCTCATTTACTACACAGAGCAACAGTGCTCTGAATGCACCGCAAACATCTCTGAAAGTTCATGAAGTTTCCATAATCAAGATGGAAGCGGCCCTTCTCACCGCCATCCCATCAGTCCTTCCGAACAGAATGAATCATTATAACCTTCGCGTCAACCTCCACTTGAGAGACGCATTCCTACAGCAAGCGCACAAAGACAGTCACGGTGCAACAACAACACGTAGGCCTACGTCTCTCGCTTTTTTCTCCCGCTGTAGTTTGGCTTGATGAACGTACGATTTATGTAACAAAACTAAAGAACATGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_07961608_07968820.mRNA True 1651 mRNA 0.50 3 7961565 7968949

Neighbor

gene id symbol gene type direction distance location
CI01000304_07612069_07709665 NA coding downstream 251900 7612069 ~ 7709665 (-)
CI01000304_07464639_07466430 NA coding downstream 495135 7464235 ~ 7466430 (-)
CI01000304_07325899_07328203 NA coding downstream 633362 7325648 ~ 7328203 (-)
CI01000304_07303509_07309222 STARD7 coding downstream 649854 7302824 ~ 7311711 (-)
CI01000304_07282197_07285838 NA coding downstream 675727 7281481 ~ 7285838 (-)
CI01000304_08165245_08217042 NA coding upstream 196248 8165197 ~ 8217042 (-)
CI01000304_08218405_08218927 NA coding upstream 248685 8217634 ~ 8218927 (-)
CI01000304_08329095_08386362 GFRA2B, GFRA2 coding upstream 360146 8329095 ~ 8386362 (-)
CI01000304_08510508_08532975 NA coding upstream 541521 8510470 ~ 8533026 (-)
CI01000304_08567281_08570808 PBDC1 coding upstream 598245 8567194 ~ 8570808 (-)
G422918 NA non-coding downstream 32059 7928969 ~ 7929506 (-)
G422841 NA non-coding downstream 41775 7916488 ~ 7919790 (-)
G422846 NA non-coding downstream 46612 7913434 ~ 7914953 (-)
G422843 NA non-coding downstream 58802 7901473 ~ 7902763 (-)
G422895 NA non-coding downstream 127498 7833792 ~ 7834067 (-)
G422931 NA non-coding upstream 1539 7970488 ~ 7970694 (-)
G422933 NA non-coding upstream 6994 7975943 ~ 7976391 (-)
G422935 NA non-coding upstream 12781 7981730 ~ 7981941 (-)
G422939 NA non-coding upstream 33451 8002400 ~ 8004601 (-)
G422946 NA non-coding upstream 45093 8014042 ~ 8016684 (-)
G422810 NA other downstream 308862 7630159 ~ 7652703 (-)
G422378 NA other downstream 1178519 6744679 ~ 6783046 (-)
G422354 NA other downstream 1330066 6631086 ~ 6631499 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other downstream 1478070 6480743 ~ 6483986 (-)
CI01000304_04661808_04672936 PPWD1 other downstream 3288618 4661766 ~ 4672947 (-)
G423386 NA other upstream 893274 8862223 ~ 8865296 (-)
CI01000304_09566730_09575706 NA other upstream 1599407 9566730 ~ 9575706 (-)
CI01000304_09737662_09738777 NA other upstream 1767797 9736746 ~ 9738777 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 2184497 10160458 ~ 10163762 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 2221625 10190574 ~ 10192357 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_002700 adra1ab coding NC_007121.7 CM002894.2 18999841 ~ 19011934 (-)