XLOC_012869


Basic Information

Item Value
gene id XLOC_012869
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 31872021 ~ 31872676 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026911
ATGAGAGGTTGTCCATGTGCACAACAGAGAGTTCCAGTTCAGCCTCAAGGACCTCAACACCGACACCTATACAACCAGCTTAATCAGCTTAAAATTAACCTCATCGTGTGCCATTTGGCAAGAGGAAGAAAGGACAGCAGGATGTTGATGCAGCTCTGGCACAGTTACAAGCATCTGATGAAAGGCATCAGGAATGGCTGGAGAGGGTGGAGGACCAGCGGTTTGAAATGATGCTGGAGGATGATCGTGAGGCAAGACGGCATGAGGCTGAAATAATCCGTCAACACATGGAGCAGACGTCGAGCTACAATCAGGCCTTCCTCAGCACACTCGGCCAGCTGGTGCAGGTGCTAAGTAGTAGCTGTAACCCAGCCTAATCATCCAAAAACTGGACTTTTGAGCACTGACTTGAAACTGtcgacactttttttttaatgattgattGCACCACTCTCTTAGTTTTGCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026911 True 466 lncRNA 0.48 2 31872021 31872676

Neighbor

gene id symbol gene type direction distance location
XLOC_012868 BX908763.1 coding upstream 25465 31845504 ~ 31846556 (+)
XLOC_012867 dhx36 coding upstream 34261 31610744 ~ 31837760 (+)
XLOC_012866 NA coding upstream 350330 31519578 ~ 31521691 (+)
XLOC_012865 NA coding upstream 412534 31280850 ~ 31459487 (+)
XLOC_012864 tcf25 coding upstream 665363 31117136 ~ 31206658 (+)
XLOC_012870 NA coding downstream 126532 31999208 ~ 32002709 (+)
XLOC_012871 BX908386.1 coding downstream 145425 32018101 ~ 32023119 (+)
XLOC_012872 NA coding downstream 167620 32040296 ~ 32041964 (+)
XLOC_012873 BX649622.2 coding downstream 212263 32084939 ~ 32088944 (+)
XLOC_012874 NA coding downstream 252615 32125291 ~ 32126339 (+)
XLOC_012863 NA non-coding upstream 796402 31073243 ~ 31075619 (+)
XLOC_012854 NA non-coding upstream 1740190 30129771 ~ 30131831 (+)

Expression


Co-expression Network