XLOC_012873 (BX649622.2)


Basic Information

Item Value
gene id XLOC_012873
gene name BX649622.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 32084939 ~ 32088944 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025687
GAAGCGATGCCACCGAGAGAACACCCTTGTGCTATTTTAGGATGTAAGGCTCAGCACAAGAGCCTTCACCGTCTTCCTGCAAATGAGCAACAGAGGCTTAAGTGGCTGAGTTTTATCTTTGAAGACAAGGTGCCTGAAAATGTACCAAAACTGTTGTATGTTTGCGCTAACCACTTTAGCGTAGACTGCCTCGAGAACGCGGGACAATACAACTCCGGATTCGCgagtaaattgtttttgaaaaccgGATCAGTTCCTACAATACGTGATCCTGTCTCACTTCAAGCCACGACGTCGACAAAGAGCAACAAGGTGGATGTTGCTTGCCAGACAGAAACTTTTCACACATCTTTACACAGTGTTGGCACCCAGTTGTCTTTTAGGACGCTTCAGGCTAAACGCAGGAGTACAAGTGTCCAGACAACAATATCCAGTTTTGAACTGACTGTGCCATCAGCGTCCTCTACTGCGTTTATGACTTCGACACCCCTCAAACCTTCACTAAAAAGACCTCGTCTggagctggaggaggaggaggaggaggaggaagaagaagaagccgAAGAGACTTTGACAGAGTCAAAAATTATAGCCCAAGACTCGGATGTGACATTTGACCCTGCAGAGGAATGCACATCTGCAACTGAACCAACAGACTTGTCaatccAAGAATGCCCAGTTCATAACATTGCCAAGTTCATTGTCTATGAAACATGCCTCATGGAGCTCTTCAGTGACTGCCCAGTGTGTCAGAGGAGATGTGATGTAGTCACAAAGGCTTGGGACATTTCTGAGCGTACAGCAAGTCTGCCCACACTGCGAGTTTGTAAGAAAATGGAACAGTCAGCCAATTATTGGTAGTACTCCAGCTGGCAACCTGCATCTTTCTGCTGCAGTCTACTTGAGCGGTGCATCATTTTTTGTAGTTGAAAAGGTATTTGCTGCAATGAagctacacatttttaaatataattcatttcgCCGTCATGCAAGACTTTGCATTGAACCTgctattgtccacaagtggagaAATTGGCAGAGTGAAATGCTAGAACAGCTCAGTCGAAGAGAGAATGTGATTGTTGGAGGAGATATGAGGGCTGACTCCCCAGGTCACTCGGCCAAGTATGGGAGTTATACAATGATGGACCTTGCAACTAACACAGTGGTCGACCTACAGTTAGTCCAGagTAATGAGGTGGGTGGCAGTTACCATATGGAAAAAGAAGGCCTAAAGAGAAGCCTTGACCTGTTGGATGCCCGCGGTGTTCGTCTGGAATGCATCATCACAGACCGACAtcctcaaatacagaaatacctCAGGGATCGAAATGTCACTCAGTTTTACGATGTGTGGCATATCGAGAAAGGAATTTCCAAAAAACTGGACAAGATATGCCAGATAAAGGGGTGTGAGAAGTTGCGTAAATGGTTACGTAGCATCAAAAACCACATCTACTGGACTGCTGCATCATCCACAACAGGTCCTGAAAGAGTGGCAAAGTGGACCTCTATCTTAAACCATGTACAAGACAAACATGTACATGAAGACCCCAGTTTTCCGGCTTGTCTGCATCCGCAACGGATAAGCAGAGACAAGAACAAATGGCTGTCGGCTGCAACGATGCCATTCTACAAGCTGGAGAAAGTTCTCGCTAACAAGAGAATATTGAAGGATGTGGCCAAGCTAAGTCCTCACCACCAGACGTCAACTGTTGAAGCTTTCCACAGCGTCATACTGCGGTTTGCACCCAAAAATGTGGTATTCCCTTTTCTGGGGATGCTATGCAGgtTGTACTTGGCTGCACTGCATTACAATGAAAATGCCGGGCGTCCCCAGGCCACATCAGCAACTGGTAAACCTATTTACAAGCTTGCCTTTCCAAAGGCAAAGAAAGGAGAGTATAGGGTCCGAGAAGTGAAGACACAGCAAACTTTCgGTTATGTAGAAGAGCTGCTGGACCTCATCTTCAACCAAGTGTTTGTGGACCCATCACCCTATGTTGATGAAGTGTTGGGAATTCACATACCACCTGCTCTATCATCAGCCTACGATCGACCTGAGATGGAGGAGGCTATCTCCAGCAGGGTGACCCGCTTCAATCAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105085

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025687 True 2107 unprocessed_pseudogene 0.46 11 32084939 32088944

Neighbor

gene id symbol gene type direction distance location
XLOC_012872 NA coding upstream 42975 32040296 ~ 32041964 (+)
XLOC_012871 BX908386.1 coding upstream 61820 32018101 ~ 32023119 (+)
XLOC_012870 NA coding upstream 82230 31999208 ~ 32002709 (+)
XLOC_012869 NA coding upstream 212263 31872021 ~ 31872676 (+)
XLOC_012868 BX908763.1 coding upstream 238383 31845504 ~ 31846556 (+)
XLOC_012874 NA coding downstream 36347 32125291 ~ 32126339 (+)
XLOC_012875 NA coding downstream 91127 32180071 ~ 32363182 (+)
XLOC_012876 olfcg12 coding downstream 355692 32444636 ~ 32449308 (+)
XLOC_012877 BX908401.1 coding downstream 367102 32456046 ~ 32457443 (+)
XLOC_012878 NA coding downstream 447640 32536584 ~ 32537445 (+)
XLOC_012884 NA non-coding downstream 807632 32896576 ~ 32897362 (+)

Expression


Co-expression Network