XLOC_012875



Basic Information


Item Value
gene id XLOC_012875
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 32180071 ~ 32363182 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00027124
ATGGGCTTTGTTCAGAGGGATTTCGGTAAGAGATATTTGTAAAGCGGCAAGTTGGTCTTCCCCGCAtacatttatcaggttttaccGCCTTGACGTCTTCGCGCCTTCATTGGCTCAGGCGGTTCTTAATGTGTGTCCCTTATAAGCTTGAAAGGTTGTCTTTCTACCGATTCTGTCCGGGGGCTTCGGAAAGCATGCGTTACGGGAGTGGTATATATCATTCCCATAGTGAGATACCAAGCGAATGTTTGAAAGAGAACGCTAGGTTACTTGCGTAACCCCGGTTCTCTGAGAACAGAGCGAGGTGTCTCACCAGACTTCCCTTCACGCATTACACTCGGGAAGAGCGTGCTTCGAATGCCGATTCTGGGAATCACAGCGGATTATAAAGGAGAGGGTGGGCTCCTAATCGTGAGCTGTGATTTGTCCGTCCTCAGACGGACGTGGTGTAATTGGTGCTTCCACAGTCTGTCACGCCTGAGGCGTTTCCCATAGTGAGATACCTCGCTCTGTTCTCAGAGAACCGGGGTTACACAAGTAACCTagcTTTCTCTTTCAAACATTC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00027124 True 565 lncRNA 0.49 2 32180071 32363182

Neighbor


gene id symbol gene type direction distance location
XLOC_012874 NA coding upstream 53732 32125291 ~ 32126339 (+)
XLOC_012873 BX649622.2 coding upstream 91127 32084939 ~ 32088944 (+)
XLOC_012872 NA coding upstream 138107 32040296 ~ 32041964 (+)
XLOC_012871 BX908386.1 coding upstream 156952 32018101 ~ 32023119 (+)
XLOC_012870 NA coding upstream 177362 31999208 ~ 32002709 (+)
XLOC_012876 olfcg12 coding downstream 81454 32444636 ~ 32449308 (+)
XLOC_012877 BX908401.1 coding downstream 92864 32456046 ~ 32457443 (+)
XLOC_012878 NA coding downstream 173402 32536584 ~ 32537445 (+)
XLOC_012879 olfcg1 coding downstream 200372 32563554 ~ 32567412 (+)
XLOC_012880 CABZ01012885.1 coding downstream 251893 32615075 ~ 32621477 (+)
XLOC_012884 NA non-coding downstream 533394 32896576 ~ 32897362 (+)
XLOC_012885 NA non-coding downstream 543307 32906489 ~ 32912601 (+)
XLOC_012896 NA non-coding downstream 802431 33165613 ~ 33168091 (+)

Expression



Co-expression Network